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Assembly Name: uagpf v2.0

Name: mRNA processing

Term: GO:0006397  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene38260 uagpf v2.0 420
AutoFact: cell cycle control crn (crooked neck) protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: pre-mrna-splicing factor clf1 0.0
Internal
uagpf_v2_unigene38810 uagpf v2.0 273
AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene39137 uagpf v2.0 346
AutoFact: Type II intron maturase family protein n=4 Tax=Andropogoneae RepID=B6SWF1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized mitochondrial protein ymf11-like 0.0
Internal
uagpf_v2_unigene39338 uagpf v2.0 432
AutoFact: ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich splicing 0.0
Internal
uagpf_v2_unigene39500 uagpf v2.0 293
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SPB9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: superkiller viralicidic activity 2-like 2-like 0.0
Internal
uagpf_v2_unigene42848 uagpf v2.0 230
AutoFact: Type II intron maturase family protein n=4 Tax=Andropogoneae RepID=B6SWF1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized mitochondrial protein ymf11-like 0.0
Internal
uagpf_v2_unigene45112 uagpf v2.0 273
AutoFact: Protein kinase MK5 n=1 Tax=Mesembryanthemum crystallinum RepID=Q9M598_MESCR 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 9.37664e-25
Putative N-terminus
uagpf_v2_unigene46339 uagpf v2.0 430
AutoFact: putative protein kinase (AME2/AFC1) [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
C-terminus
uagpf_v2_unigene47345 uagpf v2.0 271
AutoFact: uridylate kinase [Arabidopsis thaliana] dbj|BAB01794.1| unnamed protein product [Arabidopsis thaliana] gb|AAK92763.1| putative uridylate kinase [Arabidopsis thaliana] gb|AAM14100.1| putative uridylate kinase [Arabidopsis thaliana] gb|AEE76131.1| uridylate 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uridylate kinase 0.0
Internal
uagpf_v2_unigene50015 uagpf v2.0 609
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_818.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TRX8_VITVI 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 3b subunit 2-like 0.0
Putative C-terminus
uagpf_v2_unigene50528 uagpf v2.0 350
AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain