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Assembly Name: uagpf v2.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene53904 uagpf v2.0 434
AutoFact: Anaphase-promoting complex subunit 11 n=8 Tax=Magnoliophyta RepID=APC11_ARATH 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: anaphase-promoting complex subunit 11 0.0
Putative Complete
uagpf_v2_unigene53959 uagpf v2.0 584
AutoFact: BTF3b-like transcription factor [Musa acuminata] 5.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene53968 uagpf v2.0 378
AutoFact: Calcineurin B-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZGA7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcineurin b-like protein 0.0
C-terminus
uagpf_v2_unigene54039 uagpf v2.0 538
AutoFact: Retinoblastoma-related protein n=1 Tax=Cocos nucifera RepID=RBR_COCNU 0.0
FL-Next: sp=Retinoblastoma-related protein; Cocos nucifera (Coconut). 0.0
Blast2go: retinoblastoma-related protein 0.0
Internal
uagpf_v2_unigene54069 uagpf v2.0 421
AutoFact: glycolipid transfer protein-like protein [Arabidopsis thaliana] gb|AAC16265.1| unknown protein [Arabidopsis thaliana] gb|AAS76271.1| At2g34690 [Arabidopsis thaliana] gb|AEC09010.1| glycolipid transfer protein-like protein [Arabidopsis thaliana] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.68156e-44
Putative C-terminus
uagpf_v2_unigene54100 uagpf v2.0 522
AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 6.0e-26
Blast2go: zinc finger 2.45808e-31
unknown
uagpf_v2_unigene54101 uagpf v2.0 368
AutoFact: MSI type nucleosome/chromatin assembly factor C [Zea mays] gb|AAL33648.1|AF440219_1 MSI type nucleosome/chromatin assembly factor C [Zea mays] gb|ACN33308.1| unknown [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
C-terminus
uagpf_v2_unigene54107 uagpf v2.0 489
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gb|AAD24639.1| putative receptor-like protein kinase [Arabidopsis thaliana] gb|ACN59305.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AEC09269.1| leucin 0.0
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at1g68400-like 0.0
C-terminus
uagpf_v2_unigene54134 uagpf v2.0 445
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta-1 0.0
Internal
uagpf_v2_unigene54211 uagpf v2.0 634
AutoFact: 40S ribosomal S4 protein [Glycine max] gb|ACU21252.1| unknown [Glycine max] 0.0
FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene54234 uagpf v2.0 638
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 4.0e-36
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Blast2go: f-box family protein 6.99949e-42
Internal
uagpf_v2_unigene54274 uagpf v2.0 499
AutoFact: GDP-mannose 4,6 dehydratase 1 [Arabidopsis thaliana] sp|Q9SNY3.1|GMD1_ARATH RecName: Full=GDP-mannose 4,6 dehydratase 1; AltName: Full=GDP-D-mannose dehydratase 1; Short=GMD 1 gb|AAF07199.1|AF195140_1 GDP-D-mannose 4,6-dehydratase [Arabidopsis thaliana] d 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene54276 uagpf v2.0 383
AutoFact: Cyclin-dependent kinases regulatory subunit 1 n=7 Tax=core eudicotyledons RepID=CKS1_ARATH 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinases regulatory subunit 0.0
N-terminus
uagpf_v2_unigene54327 uagpf v2.0 406
AutoFact: Calcineurin B-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZGA7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcineurin b-like protein 0.0
C-terminus
uagpf_v2_unigene54343 uagpf v2.0 522
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta-1 0.0
Internal
uagpf_v2_unigene54345 uagpf v2.0 647
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta-1 0.0
Internal
uagpf_v2_unigene54351 uagpf v2.0 242
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
Blast2go: multicopy suppressor of ira1 0.0
unknown
uagpf_v2_unigene54364 uagpf v2.0 284
AutoFact: T complex protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit epsilon 0.0
Internal
uagpf_v2_unigene54371 uagpf v2.0 362
AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 2.68218e-30
Putative Complete
uagpf_v2_unigene54381 uagpf v2.0 551
AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RE67_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ruvb-like 1-like 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain