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Assembly Name: uagpf v2.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene51971 uagpf v2.0 461
• AutoFact: glycolipid transfer protein-like protein [Arabidopsis thaliana] gb|AAC16265.1| unknown protein [Arabidopsis thaliana] gb|AAS76271.1| At2g34690 [Arabidopsis thaliana] gb|AEC09010.1| glycolipid transfer protein-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene51975 uagpf v2.0 614
• AutoFact: BTB multi-domain protein 5.0e-26
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene52042 uagpf v2.0 434
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
C-terminus
uagpf_v2_unigene52086 uagpf v2.0 439
• AutoFact: peroxisomal targeting signal type 2 receptor [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: peroxin 7 0.0
C-terminus
uagpf_v2_unigene52092 uagpf v2.0 622
• AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
uagpf_v2_unigene52106 uagpf v2.0 536
• AutoFact: PR-4 type protein [Vitis vinifera] gb|ADG35965.1| pathogenesis-related protein 4 [Vitis hybrid cultivar] 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hevein-like protein 6.02417e-16
C-terminus
uagpf_v2_unigene52125 uagpf v2.0 473
• AutoFact: pfam01425, Amidase, Amidase 0.0
• Blast2go: amidase family protein 0.0
unknown
uagpf_v2_unigene52172 uagpf v2.0 391
• AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arginine serine-rich-splicing factor rsp41 0.0
C-terminus
uagpf_v2_unigene52214 uagpf v2.0 425
• AutoFact: Os03g0773700 protein (Fragment) n=4 Tax=Oryza sativa RepID=Q0DN56_ORYSJ 5.0e-21
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: receptor protein kinase clavata1 7.62271e-21
Internal
uagpf_v2_unigene52239 uagpf v2.0 467
• AutoFact: PREG-like protein (Fragment) n=1 Tax=Picea mariana RepID=O65065_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene52268 uagpf v2.0 228
• AutoFact: Heterogeneous nuclear ribonucleoprotein A3-like protein 2 n=3 Tax=Andropogoneae RepID=B6TV58_MAIZE 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 4.12995e-21
Internal
uagpf_v2_unigene52271 uagpf v2.0 269
• AutoFact: putative transcription factor [Oryza sativa Japonica Group] gb|ABF99747.1| acyl-CoA binding family protein, putative, expressed [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: acyl- binding protein 4 0.0
C-terminus
uagpf_v2_unigene52279 uagpf v2.0 423
• AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone deacetylase 0.0
Putative Complete
uagpf_v2_unigene52392 uagpf v2.0 499
• AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
unknown
uagpf_v2_unigene52414 uagpf v2.0 269
• AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 0.0
• Blast2go: protein 0.0
Coding
uagpf_v2_unigene52477 uagpf v2.0 336
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 0.0
C-terminus
uagpf_v2_unigene52566 uagpf v2.0 291
• AutoFact: Coronatine-insensitive protein, putative n=1 Tax=Ricinus communis RepID=B9SWQ0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coronitine insensitive 1 0.0
Internal
uagpf_v2_unigene52628 uagpf v2.0 545
• AutoFact: GDP-mannose 4,6-dehydratase [Thermosynechococcus elongatus BP-1] dbj|BAC08185.1| GDP-mannose 4,6-dehydratase [Thermosynechococcus elongatus BP-1] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gdp-mannose -dehydratase 0.0
N-terminus
uagpf_v2_unigene52652 uagpf v2.0 483
• AutoFact: Calcium-dependent protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCK2_RICCO 0.0
• Blast2go: calcium-dependent protein kinase 0.0
unknown
uagpf_v2_unigene52695 uagpf v2.0 397
• AutoFact: zinc finger protein 330 variant [Homo sapiens] 0.0
• Blast2go: zinc finger protein 330 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain