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Assembly Name: uagpf v2.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene51436 uagpf v2.0 353
• AutoFact: Ras-related protein RABE1c n=6 Tax=rosids RepID=RAE1C_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein ara-3 0.0
C-terminus
uagpf_v2_unigene51468 uagpf v2.0 608
• AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAM13156.1| unknown protein [Arabidopsis thaliana] gb|AAN15609.1| unknown protein [Arabidopsis thaliana] gb|AEE29984.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transducin family protein 0.0
C-terminus
uagpf_v2_unigene51480 uagpf v2.0 380
• AutoFact: pantothenate kinase 2 (Hallervorden-Spatz syndrome) [Rattus norvegicus] gb|EDL80236.1| pantothenate kinase 2 (Hallervorden-Spatz syndrome) (predicted), isoform CRA_a [Rattus norvegicus] 5.04467e-44
• Blast2go: pantothenate kinase 1 0.0
unknown
uagpf_v2_unigene51493 uagpf v2.0 637
• AutoFact: WRKY transcription factor NtEIG-D48 [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky transcription factor 11 0.0
Internal
uagpf_v2_unigene51606 uagpf v2.0 232
• AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 0.0
• Blast2go: histone acetyltransferase 0.0
unknown
uagpf_v2_unigene51607 uagpf v2.0 433
• AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAU94425.1| At1g65030 [Arabidopsis thaliana] gb|AEE34317.1| WD40 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: p21-activated protein kinase-interacting protein 1-like 0.0
Internal
uagpf_v2_unigene51624 uagpf v2.0 342
• AutoFact: cyclin-dependent kinase F-1 [Arabidopsis thaliana] ref|NP_849468.1| cyclin-dependent kinase F-1 [Arabidopsis thaliana] sp|O80345.1|CDKF1_ARATH RecName: Full=Cyclin-dependent kinase F-1; Short=CDKF;1; AltName: Full=CDK-activating kinase 1-At; Short=CAK1-At 3.0e-34
• Blast2go: cyclin-dependent kinase f-1 0.0
unknown
uagpf_v2_unigene51634 uagpf v2.0 246
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
• Blast2go: ddb1- and cul4-associated factor 8-like 0.0
unknown
uagpf_v2_unigene51669 uagpf v2.0 386
• AutoFact: Beta-galactosidase n=1 Tax=Picea sitchensis RepID=B8LLU8_PICSI 0.0
• FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta-galactosidase 1-like 0.0
Internal
uagpf_v2_unigene51683 uagpf v2.0 308
• AutoFact: Herpes_gp2 multi-domain protein 2.0e-06
• Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene51713 uagpf v2.0 457
• AutoFact: Hydrolase, hydrolyzing O-glycosyl compounds, putative n=1 Tax=Ricinus communis RepID=B9T139_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: imbibition protein homolog 0.0
Internal
uagpf_v2_unigene51718 uagpf v2.0 345
• AutoFact: cleavage/polyadenylation specificity factor [Arabidopsis thaliana] dbj|BAC42701.1| unknown protein [Arabidopsis thaliana] gb|AAO63939.1| unknown protein [Arabidopsis thaliana] dbj|BAF00402.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85076.1| clea 0.0
• Blast2go: cleavage and polyadenylation specificity factor 5 0.0
unknown
uagpf_v2_unigene51757 uagpf v2.0 359
• AutoFact: CDC27 domain containing protein 4.0e-06
• FL-Next: sp=DNA-binding protein BIN4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-binding protein bin4 0.0
Internal
uagpf_v2_unigene51764 uagpf v2.0 430
• AutoFact: putative ARP2/3 complex 20 kDa subunit, 3'-partial [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: actin-related protein 2 3 complex subunit 4-like 0.0
N-terminus
uagpf_v2_unigene51770 uagpf v2.0 430
• AutoFact: vesicle-associated membrane protein 722 [Arabidopsis thaliana] sp|P47192.2|VA722_ARATH RecName: Full=Vesicle-associated membrane protein 722; Short=AtVAMP722; AltName: Full=Synaptobrevin-related protein 1 gb|AAL31896.1|AF419564_1 At2g33120/F25I18.14 [Arab 0.0
• Blast2go: vesicle-associated membrane synaptobrevin 7b 0.0
unknown
uagpf_v2_unigene51850 uagpf v2.0 219
• AutoFact: methyl-CPG-binding domain protein 5 [Arabidopsis thaliana] sp|Q9SNC0.1|MBD5_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 5; Short=AtMBD5; Short=MBD05; AltName: Full=Methyl-CpG-binding protein MBD5 emb|CAB62328.1| putative protein [Arab 3.0e-13
• Blast2go: methyl binding domain protein 1.7833e-22
Putative coding
uagpf_v2_unigene51898 uagpf v2.0 537
• AutoFact: Unassigned protein
• Blast2go: uncharacterized protein mitochondrial-like 0.0
unknown
uagpf_v2_unigene51907 uagpf v2.0 758
• AutoFact: cyclin-dependent kinases regulatory subunit [Glycine max] gb|ACU14766.1| unknown [Glycine max] 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinases regulatory subunit 0.0
Complete
uagpf_v2_unigene51915 uagpf v2.0 370
• AutoFact: Calcium-dependent protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCK2_RICCO 0.0
• Blast2go: calcium-dependent protein kinase 0.0
unknown
uagpf_v2_unigene51965 uagpf v2.0 460
• AutoFact: PII-like protein n=1 Tax=Pinus pinaster RepID=Q70YP6_PINPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pii protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain