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Assembly Name: uagpf v2.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2280 uagpf v2.0 1034
AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Complete
uagpf_v2_unigene2297 uagpf v2.0 650
AutoFact: Ubiquinone biosynthesis protein coq-8, putative n=1 Tax=Ricinus communis RepID=B9RN20_RICCO 0.0
FL-Next: tr=Ubiquinone biosynthesis protein coq-8, putative; Ricinus communis (Castor bean). 0.0
Blast2go: abc1 protein 0.0
Putative C-terminus
uagpf_v2_unigene2302 uagpf v2.0 1287
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
Blast2go: serine threonine protein phosphatase 0.0
Coding
uagpf_v2_unigene2333 uagpf v2.0 919
AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene2343 uagpf v2.0 895
AutoFact: Cytochrome c biogenesis protein-like n=2 Tax=Oryza sativa RepID=Q6K7S7_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome c biogenesis protein 0.0
Complete
uagpf_v2_unigene2368 uagpf v2.0 780
AutoFact: Double-stranded RNA binding protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TW99_PHYPA 1.0e-24
Blast2go: dsrna-binding protein 4.67357e-29
unknown
uagpf_v2_unigene2390 uagpf v2.0 780
AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene2435 uagpf v2.0 745
AutoFact: 5-hydroxyisourate hydrolase (Fragment) n=2 Tax=Vitis vinifera RepID=D7T3Z8_VITVI 0.0
FL-Next: Isoform 2 of Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL 0.0
Blast2go: 5-hydroxyisourate hydrolase 0.0
C-terminus
uagpf_v2_unigene2465 uagpf v2.0 405
AutoFact: Histone deacetylase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TG19_PHYPA 0.0
Blast2go: histone deacetylase 0.0
unknown
uagpf_v2_unigene2487 uagpf v2.0 513
AutoFact: RecName: Full=Probable NOT transcription complex subunit VIP2; AltName: Full=Protein VIRE2 INTERACTING PROTEIN2; Short=NbVIP2 gb|AAY15746.1| VIP2 [Nicotiana benthamiana] 0.0
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable not transcription complex subunit vip2-like 0.0
Internal
uagpf_v2_unigene2494 uagpf v2.0 783
AutoFact: Retinoblastoma-related protein n=1 Tax=Cocos nucifera RepID=RBR_COCNU 0.0
FL-Next: sp=Retinoblastoma-related protein; Cocos nucifera (Coconut). 0.0
Blast2go: retinoblastoma-related protein 0.0
Internal
uagpf_v2_unigene2495 uagpf v2.0 229
AutoFact: PCF11P-similar protein 4 [Arabidopsis thaliana] dbj|BAF00997.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82437.1| PCF11P-similar protein 4 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene2497 uagpf v2.0 386
AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S4B8_RICCO 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lob domain-containing 1.79563e-15
N-terminus
uagpf_v2_unigene2514 uagpf v2.0 1044
AutoFact: putative plastidic ATP/ADP transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastidic atp adp transporter 0.0
C-terminus
uagpf_v2_unigene2535 uagpf v2.0 699
AutoFact: kinesin 1 [Arabidopsis thaliana] sp|Q07970.1|ATK1_ARATH RecName: Full=Kinesin-1; AltName: Full=Kinesin-like protein A dbj|BAA01972.1| kinesin-like motor protein heavy chain [Arabidopsis thaliana] emb|CAA17546.1| kinesin-related protein katA [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene2548 uagpf v2.0 582
AutoFact: F-box protein GID2, putative n=1 Tax=Ricinus communis RepID=B9R752_RICCO 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein gid2-like 0.0
C-terminus
uagpf_v2_unigene2575 uagpf v2.0 648
AutoFact: DNA repair protein XRCC3-like protein [Arabidopsis thaliana] ref|NP_851202.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana] sp|Q9FKM5.1|XRCC3_ARATH RecName: Full=DNA repair protein XRCC3 homolog; AltName: Full=X-ray repair cross-complementi 7.0e-36
FL-Next: sp=DNA repair protein XRCC3 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein xrcc3-like protein 2.10195e-44
Internal
uagpf_v2_unigene2589 uagpf v2.0 632
AutoFact: ZIP family metal transporter n=1 Tax=Chengiopanax sciadophylloides RepID=Q2Z1Q1_CHESC 0.0
Blast2go: zip transporter 0.0
unknown
uagpf_v2_unigene2590 uagpf v2.0 368
AutoFact: Phytochelatins synthase n=1 Tax=Allium sativum RepID=Q8GZS8_ALLSA 0.0
FL-Next: sp=Glutathione gamma-glutamylcysteinyltransferase 2; Lotus japonicus. 0.0
Blast2go: phytochelatin synthase 0.0
Putative N-terminus
uagpf_v2_unigene2631 uagpf v2.0 357
AutoFact: UPF0497 membrane protein 2 n=1 Tax=Picea sitchensis RepID=U4972_PICSI 0.0
FL-Next: sp=CASP-like protein 6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: salicylic acid-induced fragment 1 protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain