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Assembly Name: uagpf v2.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene964 uagpf v2.0 1561
AutoFact: Retinoblastoma-related protein n=1 Tax=Cocos nucifera RepID=RBR_COCNU 0.0
FL-Next: sp=Retinoblastoma-related protein; Camellia sinensis (Tea). 0.0
Blast2go: retinoblastoma-related protein 0.0
N-terminus
uagpf_v2_unigene989 uagpf v2.0 1271
AutoFact: sucrose nonfermenting 4-like protein [Arabidopsis thaliana] gb|AAL27498.1|AF439826_1 At1g09020/F7G19_11 [Arabidopsis thaliana] gb|AAN18191.1| At1g09020/F7G19_11 [Arabidopsis thaliana] gb|ABA12450.1| AKINbetagamma [Arabidopsis thaliana] gb|AEE28383.1| sucr 0.0
FL-Next: sp=Sucrose nonfermenting 4-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sucrose nonfermenting 4-like isoform 1 0.0
C-terminus
uagpf_v2_unigene1004 uagpf v2.0 553
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
N-terminus
uagpf_v2_unigene1019 uagpf v2.0 648
AutoFact: Transferrin, putative n=1 Tax=Ricinus communis RepID=B9T880_RICCO 0.0
Blast2go: achain human serum transferrin 0.0
unknown
uagpf_v2_unigene1103 uagpf v2.0 337
AutoFact: amyloid beta precursor protein binding protein 1 [Arabidopsis thaliana] sp|P42744.1|ULA1_ARATH RecName: Full=NEDD8-activating enzyme E1 regulatory subunit; AltName: Full=Auxin-resistance protein AXR1 gb|AAB59348.1| ubiquitin-activating enzyme E1 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nedd8-activating enzyme e1 regulatory subunit 0.0
Putative N-terminus
uagpf_v2_unigene1124 uagpf v2.0 1216
AutoFact: putative poly(A) polymerase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear poly polymerase 0.0
C-terminus
uagpf_v2_unigene1130 uagpf v2.0 437
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
Blast2go: histone h2b like protein 0.0
unknown
uagpf_v2_unigene1136 uagpf v2.0 423
AutoFact: CDC27 domain containing protein 4.0e-06
Blast2go: dna-binding protein bin4 0.0
unknown
uagpf_v2_unigene1188 uagpf v2.0 1323
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9IPU4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cationic amino acid transporter 0.0
Putative N-terminus
uagpf_v2_unigene1197 uagpf v2.0 658
AutoFact: prolyl-tRNA synthetase [Arabidopsis thaliana] ref|NP_850736.1| prolyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB71872.1| multifunctional aminoacyl-tRNA ligase-like protein [Arabidopsis thaliana] gb|AAL24294.1| multifunctional aminoacyl-tRNA ligase-lik 0.0
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene1200 uagpf v2.0 1157
AutoFact: serine palmitoyltransferase [Arabidopsis thaliana] ref|NP_001031796.1| serine palmitoyltransferase [Arabidopsis thaliana] dbj|BAB60898.1| serine palmitoyltransferase [Arabidopsis thaliana] gb|AAM53317.1| serine C-palmitoyltransferase like protein [Arabido 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine palmitoyltransferase 0.0
C-terminus
uagpf_v2_unigene1220 uagpf v2.0 1436
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAC34487.1| putative protein [Arabidopsis thaliana] gb|AAM97145.1| unknown protein [Arabidopsis thaliana] gb|AAO73902.1| expressed protein [Arabidopsis thaliana] gb|AAP13408.1| At5g21940 [Arabidopsis thal 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
uagpf_v2_unigene1231 uagpf v2.0 713
AutoFact: bHLH transcription factor-like [Oryza sativa Japonica Group] gb|EAY77256.1| hypothetical protein OsI_05230 [Oryza sativa Indica Group] gb|EAZ14859.1| hypothetical protein OsJ_04787 [Oryza sativa Japonica Group] 3.0e-13
Blast2go: obp3-responsive gene 3 1.35701e-14
unknown
uagpf_v2_unigene1233 uagpf v2.0 1822
AutoFact: MORN domain containing protein 4.0e-05
FL-Next: sp=Phosphatidylinositol-4-phosphate 5-kinase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene1253 uagpf v2.0 1222
AutoFact: PCF11P-similar protein 4 [Arabidopsis thaliana] dbj|BAF00997.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82437.1| PCF11P-similar protein 4 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene1254 uagpf v2.0 664
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: dna damage-binding protein 1a 0.0
C-terminus
uagpf_v2_unigene1258 uagpf v2.0 680
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gb|AAD24639.1| putative receptor-like protein kinase [Arabidopsis thaliana] gb|ACN59305.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AEC09269.1| leucin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at1g68400-like 0.0
Internal
uagpf_v2_unigene1276 uagpf v2.0 1028
AutoFact: deetiolated 1-like protein [Solanum tuberosum] 0.0
FL-Next: sp=Light-mediated development protein DET1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: light-mediated development protein det1 0.0
C-terminus
uagpf_v2_unigene1285 uagpf v2.0 327
AutoFact: CTC-interacting domain 9 protein [Arabidopsis thaliana] dbj|BAB01337.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75527.1| CTC-interacting domain 9 protein [Arabidopsis thaliana] 0.0
Blast2go: ctc-interacting domain 8 protein 0.0
unknown
uagpf_v2_unigene1312 uagpf v2.0 1574
AutoFact: WD repeat-containing protein 61 [Arabidopsis thaliana] emb|CAB43658.1| putative protein [Arabidopsis thaliana] emb|CAB79741.1| putative protein [Arabidopsis thaliana] gb|AAP37692.1| At4g29830 [Arabidopsis thaliana] gb|AEE85683.1| WD repeat-containing prot 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain