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Assembly Name: uagpf v2.0

Name: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3508 uagpf v2.0 361
AutoFact: Glycine Rich Secreted Protein family member (grsp-2) [Caenorhabditis elegans] emb|CAA90992.2| C. elegans protein T28C6.1a, confirmed by transcript evidence [Caenorhabditis elegans] 2.0e-09
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: transcription elongation factor spt6 6.83085e-14
Internal
uagpf_v2_unigene27259 uagpf v2.0 279
AutoFact: Retrotransposon protein, putative, unclassified n=16 Tax=Oryza RepID=Q2R0G5_ORYSJ 1.0e-13
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 5.30615e-16
Internal
uagpf_v2_unigene33151 uagpf v2.0 318
AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Oryza sativa Japonica Group RepID=Q8H807_ORYSJ 1.0e-06
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 1.01041e-07
Internal
uagpf_v2_unigene40541 uagpf v2.0 411
AutoFact: Retrotransposon protein, putative, unclassified n=16 Tax=Oryza RepID=Q2R0G5_ORYSJ 3.0e-28
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 1.82915e-28
Internal
uagpf_v2_unigene40772 uagpf v2.0 230
AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 6.0e-06
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: reverse transcriptase 1.3102e-08
Internal
uagpf_v2_unigene42845 uagpf v2.0 281
AutoFact: Pol polyprotein n=1 Tax=Nosema bombycis RepID=Q1KTA8_NOSBO 2.0e-08
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 4.65274e-10
Internal
uagpf_v2_unigene45774 uagpf v2.0 406
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q2QSD3_ORYSJ 3.0e-09
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 3.70738e-12
Internal
uagpf_v2_unigene56015 uagpf v2.0 567
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QVH8_ORYSJ 3.0e-05
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain