Sustainpine_db
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Assembly Name: uagpf v2.0

Name: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene9821 uagpf v2.0 267
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 1.0e-15
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 1.36119e-19
Internal
uagpf_v2_unigene34758 uagpf v2.0 210
AutoFact: integrase [Oryza officinalis] 3.0e-08
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 4.71747e-11
Internal
uagpf_v2_unigene45503 uagpf v2.0 416
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 1.0e-28
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 1.77155e-34
Internal
uagpf_v2_unigene45858 uagpf v2.0 429
AutoFact: OSJNBa0091D06.8 protein n=1 Tax=Oryza sativa RepID=Q7XU13_ORYSA 1.0e-20
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 5.74491e-24
Internal
uagpf_v2_unigene46266 uagpf v2.0 429
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 2.0e-18
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: catalytic region ribonuclease h 1.97109e-23
Internal
uagpf_v2_unigene52169 uagpf v2.0 336
AutoFact: WS0346.C21_E20 WS-SE-N-A-19 Picea glauca cDNA clone WS0346_E20 3, mRNA sequence. 0.0
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: uncharacterized protein loc100853628 3.02899e-28
Internal
uagpf_v2_unigene52919 uagpf v2.0 305
AutoFact: Integrase (Fragment) n=5 Tax=Oryza RepID=Q9LL04_9ORYZ 1.0e-13
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: AF244777_1integrase [Oryza officinalis] 1.09747e-18
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain