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Assembly Name: uagpf v2.0

Name: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene55829 uagpf v2.0 205
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 4.0e-11
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 1.27451e-13
Internal
uagpf_v2_unigene55918 uagpf v2.0 438
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 7.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 9.23952e-36
Internal
uagpf_v2_unigene55928 uagpf v2.0 600
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
uagpf_v2_unigene55952 uagpf v2.0 526
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
C-terminus
uagpf_v2_unigene55957 uagpf v2.0 297
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus thunbergii RepID=Q9ZRK1_PINTH 1.0e-17
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.56986e-23
Internal
uagpf_v2_unigene55958 uagpf v2.0 388
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene55960 uagpf v2.0 243
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon ty1-copia subclass 0.0
Internal
uagpf_v2_unigene55963 uagpf v2.0 414
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative N-terminus
uagpf_v2_unigene55966 uagpf v2.0 429
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 1.0e-14
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 2.17933e-17
C-terminus
uagpf_v2_unigene55970 uagpf v2.0 468
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 1.0e-22
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 3.60639e-26
C-terminus
uagpf_v2_unigene55973 uagpf v2.0 395
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene55974 uagpf v2.0 316
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 1.0e-22
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 3.60639e-26
Putative C-terminus
uagpf_v2_unigene55995 uagpf v2.0 562
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
uagpf_v2_unigene56000 uagpf v2.0 347
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 1.0e-18
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: reverse transcriptase 1.01554e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain