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Assembly Name: uagpf v2.0

Name: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene13787 uagpf v2.0 777
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] dbj|BAE98891.1| putative 26S proteosome regulatory subunit [Arabidopsis thaliana] gb|AEE73897.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arab 0.0
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene26296 uagpf v2.0 423
AutoFact: DUF3537 multi-domain protein 0.0
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene28100 uagpf v2.0 287
AutoFact: pfam04841, Vps16_N, Vps16, N-terminal region 0.0
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene28312 uagpf v2.0 411
AutoFact: zinc carboxy peptidase [Brachypodium sylvaticum] 0.0
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: carboxypeptidase d 0.0
N-terminus
uagpf_v2_unigene42906 uagpf v2.0 294
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: dna rna-binding protein kin17 1.00167e-32
C-terminus
uagpf_v2_unigene43850 uagpf v2.0 192
AutoFact: Bromodomain protein n=1 Tax=Populus trichocarpa RepID=B9HPS5_POPTR 1.0e-22
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: bromodomain protein 1.89235e-24
Internal
uagpf_v2_unigene48735 uagpf v2.0 337
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain