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Assembly Name: uagpf v2.0

Name: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene27242 uagpf v2.0 524
AutoFact: UPF0565 domain containing protein 5.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 7.63133e-34
C-terminus
uagpf_v2_unigene27357 uagpf v2.0 402
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 6.72623e-44
C-terminus
uagpf_v2_unigene27591 uagpf v2.0 240
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: tetratricopeptide repeat -containing protein 0.0
Internal
uagpf_v2_unigene27617 uagpf v2.0 306
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ran-binding protein 0.0
Internal
uagpf_v2_unigene27649 uagpf v2.0 279
AutoFact: Myosin_tail_1 multi-domain protein 3.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cgs1 mrna stability 0.0
C-terminus
uagpf_v2_unigene27766 uagpf v2.0 480
AutoFact: putative tethering factor SEC34 (ISS) [Ostreococcus tauri] emb|CAL52453.1| putative tethering factor SEC34 (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: sec34-like protein 0.0
Internal
uagpf_v2_unigene27768 uagpf v2.0 292
AutoFact: DUF490 domain containing protein 7.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: embryo defective 2410 protein 0.0
C-terminus
uagpf_v2_unigene27972 uagpf v2.0 412
AutoFact: WD repeat and SOF domain-containing protein 1 [Arabidopsis thaliana] gb|AAK50083.1|AF372943_1 AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAK73982.1| AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAN28840.1| At4g28450/F20O9_130 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ddb1- and cul4-associated factor 0.0
Internal
uagpf_v2_unigene28091 uagpf v2.0 344
AutoFact: WS03725.C21_M19 SS-B-N-22 Picea sitchensis cDNA clone WS03725_M19 3', mRNA sequence. 6.0e-12
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: erect panical 2 8.94318e-09
C-terminus
uagpf_v2_unigene28154 uagpf v2.0 377
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 9.38449e-34
Internal
uagpf_v2_unigene28339 uagpf v2.0 435
AutoFact: pfam00294, PfkB, pfkB family carbohydrate kinase 8.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: carbohydrate pyrimidine family protein 0.0
Internal
uagpf_v2_unigene28678 uagpf v2.0 453
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB75799.1| hypothetical protein [Arabidopsis thaliana] gb|AAY25452.1| At3g59800 [Arabidopsis thaliana] gb|AEE79970.1| uncharacterized protein [Arabidopsis thaliana] 2.0e-37
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nucleic acid binding 0.0
N-terminus
uagpf_v2_unigene28899 uagpf v2.0 362
AutoFact: pfam12490, BCAS3, Breast carcinoma amplified sequence 3 8.0e-35
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene28986 uagpf v2.0 480
AutoFact: tetratricopeptide repeat protein 39A isoform 1 [Mus musculus] sp|A2ACP1.1|TT39A_MOUSE RecName: Full=Tetratricopeptide repeat protein 39A; Short=TPR repeat protein 39A emb|CAM13657.1| tetratricopeptide repeat domain 39A [Mus musculus] 2.0e-31
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: tetratricopeptide repeat domain 39a 0.0
C-terminus
uagpf_v2_unigene28989 uagpf v2.0 372
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: u5 small nuclear ribonucleoprotein helicase 0.0
Internal
uagpf_v2_unigene29259 uagpf v2.0 381
AutoFact: Peptidase C50, separase [Medicago truncatula] 4.0e-11
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: peptidase separase 1.55884e-15
Internal
uagpf_v2_unigene29374 uagpf v2.0 263
AutoFact: transcription elongation regulator 1 [Arabidopsis thaliana] dbj|BAB01298.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76298.1| transcription elongation regulator 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: transcription elongation regulator 1-like 0.0
Internal
uagpf_v2_unigene29436 uagpf v2.0 630
AutoFact: PREDICTED: similar to splicing factor, putative n=1 Tax=Vitis vinifera RepID=UPI0001983CB2 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: splicing factor 3b subunit 1-like 0.0
Internal
uagpf_v2_unigene29498 uagpf v2.0 207
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYP9_PHYPA 3.0e-27
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 8.73503e-30
Internal
uagpf_v2_unigene29544 uagpf v2.0 419
AutoFact: putative agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Oryza sativa Japonica Group] dbj|BAD32028.1| putative agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Oryza sa 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain