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Assembly Name: biogeco2 v2.0

Name: rna-binding protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene3280 biogeco2 v2.0 1457
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
biog2_v2.0_unigene3733 biogeco2 v2.0 1812
AutoFact: putative RNA-binding like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
biog2_v2.0_unigene3988 biogeco2 v2.0 484
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
Blast2go: rna-binding protein 0.0
Putative coding
biog2_v2.0_unigene4675 biogeco2 v2.0 1664
AutoFact: oligouridylate binding protein-like protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
biog2_v2.0_unigene4729 biogeco2 v2.0 797
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: rna-binding protein 1.68156e-44
C-terminus
biog2_v2.0_unigene6193 biogeco2 v2.0 1913
AutoFact: Heterogeneous nuclear ribonucleoprotein A3-like protein 2 n=3 Tax=Andropogoneae RepID=B6TV58_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
biog2_v2.0_unigene7415 biogeco2 v2.0 591
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: rna-binding protein 0.0
Putative C-terminus
biog2_v2.0_unigene9035 biogeco2 v2.0 464
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Internal
biog2_v2.0_unigene9818 biogeco2 v2.0 788
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
Blast2go: rna-binding protein 0.0
Coding
biog2_v2.0_unigene13201 biogeco2 v2.0 481
AutoFact: protein localized in the nucleoli of pea nuclei; ORF; putative [Pisum sativum] 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 8.16201e-38
Internal
biog2_v2.0_unigene13289 biogeco2 v2.0 255
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
Blast2go: rna-binding protein 1.68156e-44
unknown
biog2_v2.0_unigene14104 biogeco2 v2.0 174
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
Blast2go: rna-binding protein 1.68156e-44
unknown
biog2_v2.0_unigene14184 biogeco2 v2.0 235
AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: rna-binding protein 0.0
Internal
biog2_v2.0_unigene15833 biogeco2 v2.0 142
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
Blast2go: rna-binding protein 0.0
unknown
biog2_v2.0_unigene17659 biogeco2 v2.0 515
AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
Blast2go: rna-binding protein 0.0
Coding
biog2_v2.0_unigene19205 biogeco2 v2.0 504
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain