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Assembly Name: biogeco2 v2.0

Name: CDC48, domain 2

Term: IPR004201  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1159 biogeco2 v2.0 485
AutoFact: N-ethylmaleimide sensitive fusion protein [Nicotiana tabacum] 0.0
FL-Next: sp=Vesicle-fusing ATPase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vesicle-fusing atpase-like 0.0
Internal
biog2_v2.0_unigene2287 biogeco2 v2.0 773
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
biog2_v2.0_unigene2604 biogeco2 v2.0 1259
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
biog2_v2.0_unigene4176 biogeco2 v2.0 1794
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle protein 48 homolog 0.0
C-terminus
biog2_v2.0_unigene4371 biogeco2 v2.0 811
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog2_v2.0_unigene4574 biogeco2 v2.0 883
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=6 Tax=Arabidopsis RepID=F4I5A3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Internal
biog2_v2.0_unigene5052 biogeco2 v2.0 988
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle protein 48 homolog 0.0
N-terminus
biog2_v2.0_unigene5666 biogeco2 v2.0 527
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: sp=Cell division control protein 48 homolog D; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cell division cycle protein 48 homolog 0.0
C-terminus
biog2_v2.0_unigene5671 biogeco2 v2.0 1078
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle protein 48 homolog 0.0
Putative Complete
biog2_v2.0_unigene6007 biogeco2 v2.0 840
AutoFact: 26S protease regulatory subunit 7 homolog A n=26 Tax=Embryophyta RepID=PRS7A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulatory particle triple-a 1a 0.0
C-terminus
biog2_v2.0_unigene7074 biogeco2 v2.0 723
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=6 Tax=Arabidopsis RepID=F4I5A3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
C-terminus
biog2_v2.0_unigene7275 biogeco2 v2.0 589
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=6 Tax=Arabidopsis RepID=F4I5A3_ARATH 0.0
FL-Next: tr=P-loop containing nucleoside triphosphate hydrolase-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Internal
biog2_v2.0_unigene7568 biogeco2 v2.0 448
AutoFact: N-ethylmaleimide sensitive fusion protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-fusing atpase-like 0.0
Internal
biog2_v2.0_unigene7773 biogeco2 v2.0 637
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: sp=Cell division control protein 48 homolog A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cell division cycle protein 48 homolog 0.0
Putative N-terminus
biog2_v2.0_unigene7927 biogeco2 v2.0 386
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIQ4_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Internal
biog2_v2.0_unigene9832 biogeco2 v2.0 341
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog2_v2.0_unigene11423 biogeco2 v2.0 229
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=6 Tax=Arabidopsis RepID=F4I5A3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Internal
biog2_v2.0_unigene14053 biogeco2 v2.0 280
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
biog2_v2.0_unigene15500 biogeco2 v2.0 139
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15583 biogeco2 v2.0 609
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=6 Tax=Arabidopsis RepID=F4I5A3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain