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Assembly Name: biogeco2 v2.0

Name: ATPase, AAA-type, core

Term: IPR003959  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene13514 biogeco2 v2.0 304
AutoFact: ATP-dependent protease La, putative n=1 Tax=Ricinus communis RepID=B9SS30_RICCO 0.0
Blast2go: atp-dependent protease 0.0
Putative coding
biog2_v2.0_unigene13811 biogeco2 v2.0 453
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] dbj|BAE98891.1| putative 26S proteosome regulatory subunit [Arabidopsis thaliana] gb|AEE73897.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene13998 biogeco2 v2.0 479
AutoFact: RecName: Full=Probable pleiotropic drug resistance protein 2 emb|CAD59566.1| PDR-like ABC transporter [Oryza sativa Japonica Group] tpg|DAA00885.1| TPA_exp: PDR2 ABC transporter [Oryza sativa (japonica cultivar-group)] 0.0
FL-Next: sp=Putative pleiotropic drug resistance protein 7; Oryza sativa subsp. japonica (Rice). 0.0
Internal
biog2_v2.0_unigene14023 biogeco2 v2.0 373
AutoFact: ATP-dependent Clp protease ATP-binding subunit precursor [Oryza sativa Indica Group] 0.0
FL-Next: sp=Chaperone protein ClpD, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene14026 biogeco2 v2.0 229
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Putative N-terminus
biog2_v2.0_unigene14053 biogeco2 v2.0 280
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
biog2_v2.0_unigene14678 biogeco2 v2.0 708
AutoFact: aspartyl aminopeptidase [Arabidopsis thaliana] emb|CAB86013.1| aspartyl aminopeptidase-like protein [Arabidopsis thaliana] dbj|BAB08975.1| aspartyl aminopeptidase [Arabidopsis thaliana] gb|AED90774.1| aspartyl aminopeptidase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aspartyl aminopeptidase 0.0
N-terminus
biog2_v2.0_unigene14684 biogeco2 v2.0 697
AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RE67_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ruvb-like 1-like 0.0
N-terminus
biog2_v2.0_unigene15015 biogeco2 v2.0 479
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8S2N6_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
Internal
biog2_v2.0_unigene15104 biogeco2 v2.0 261
AutoFact: Adenylate kinase isoenzyme 6 , putative [Solanum demissum] 0.0
Blast2go: adenylate kinase isoenzyme 0.0
unknown
biog2_v2.0_unigene15115 biogeco2 v2.0 222
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8S2N6_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
Internal
biog2_v2.0_unigene15129 biogeco2 v2.0 334
AutoFact: putative zinc dependent protease [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15231 biogeco2 v2.0 346
AutoFact: replication factor C subunit 3 [Arabidopsis thaliana] gb|AAG51681.1|AC010704_25 putative replication factor C; 24844-22715 [Arabidopsis thaliana] gb|AAL38893.1| putative replication factor C [Arabidopsis thaliana] gb|AAM51357.1| putative replication facto 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 5-like 0.0
N-terminus
biog2_v2.0_unigene15338 biogeco2 v2.0 474
AutoFact: ClpB [Phaseolus lunatus] 1.0e-38
Blast2go: chaperone protein clpb 2.10195e-42
unknown
biog2_v2.0_unigene15357 biogeco2 v2.0 575
AutoFact: ATP-dependent Clp protease ATP-binding subunit precursor [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene15409 biogeco2 v2.0 442
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: aaa-type atpase family protein 0.0
Internal
biog2_v2.0_unigene15500 biogeco2 v2.0 139
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15583 biogeco2 v2.0 609
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=6 Tax=Arabidopsis RepID=F4I5A3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
N-terminus
biog2_v2.0_unigene15912 biogeco2 v2.0 319
AutoFact: N-ethylmaleimide sensitive fusion protein [Nicotiana tabacum] 0.0
Blast2go: vesicle-fusing atpase-like 0.0
unknown
biog2_v2.0_unigene16011 biogeco2 v2.0 129
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y7_RICCO 0.0
Blast2go: zinc finger family protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain