Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene16994 biogeco2 v2.0 415
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AAU94374.1| At1g56440 [Arabidopsis thaliana] gb|AAX12885.1| At1g56440 [Arabidopsis thaliana] dbj|BAE99447.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33395.1| tetratrico 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii-associated protein 3-like 0.0
N-terminus
biog2_v2.0_unigene17405 biogeco2 v2.0 338
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin light 0.0
Internal
biog2_v2.0_unigene17601 biogeco2 v2.0 257
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 7.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene17682 biogeco2 v2.0 387
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ccr4-not transcription complex subunit 10-like 0.0
Internal
biog2_v2.0_unigene17938 biogeco2 v2.0 868
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin light 0.0
C-terminus
biog2_v2.0_unigene18232 biogeco2 v2.0 217
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAL87273.1| unknown protein [Arabidopsis thaliana] gb|AAM45091.1| unknown protein [Arabidopsis thaliana] gb|AEE27668.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: at1g04190 0.0
Internal
biog2_v2.0_unigene18348 biogeco2 v2.0 349
AutoFact: mamallian P58IPK-like protein [Arabidopsis thaliana] emb|CAB86083.1| putative protein [Arabidopsis thaliana] dbj|BAB08376.1| tetratricopeptide repeat protein 2-like [Arabidopsis thaliana] gb|AAM62560.1| unknown [Arabidopsis thaliana] gb|AED90562.1| mamall 0.0
Blast2go: dnaj homolog subfamily c member 3 homolog 0.0
unknown
biog2_v2.0_unigene18444 biogeco2 v2.0 77
AutoFact: RNA polymerase I-associated factor PAF67 [Arabidopsis thaliana] ref|NP_680223.1| RNA polymerase I-associated factor PAF67 [Arabidopsis thaliana] gb|AED93480.1| RNA polymerase I-associated factor PAF67 [Arabidopsis thaliana] gb|AED93481.1| RNA polymerase I 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit l-like 0.0
unknown
biog2_v2.0_unigene18677 biogeco2 v2.0 364
AutoFact: phosphatase SGT1b [Arabidopsis thaliana] sp|Q9SUT5.1|SGT1B_ARATH RecName: Full=Protein SGT1 homolog B; Short=AtSGT1b; AltName: Full=Protein ENHANCED DOWNY MILDEW 1; AltName: Full=Protein ENHANCER OF TIR1-1 AUXIN RESISTANCE 3; AltName: Full=Suppressor of G 0.0
FL-Next: sp=Protein SGT1 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: sgt1 0.0
C-terminus
biog2_v2.0_unigene18680 biogeco2 v2.0 781
AutoFact: phosphatase SGT1b [Arabidopsis thaliana] sp|Q9SUT5.1|SGT1B_ARATH RecName: Full=Protein SGT1 homolog B; Short=AtSGT1b; AltName: Full=Protein ENHANCED DOWNY MILDEW 1; AltName: Full=Protein ENHANCER OF TIR1-1 AUXIN RESISTANCE 3; AltName: Full=Suppressor of G 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sgt1 0.0
Putative N-terminus
biog2_v2.0_unigene18928 biogeco2 v2.0 146
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 3.0e-29
Blast2go: tpr domain protein 0.0
unknown
biog2_v2.0_unigene18996 biogeco2 v2.0 589
AutoFact: Ethylene-overproduction protein 1 n=5 Tax=Brassicaceae RepID=ETO1_ARATH 0.0
FL-Next: sp=Ethylene-overproduction protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog2_v2.0_unigene19082 biogeco2 v2.0 328
AutoFact: peptidylprolyl isomerase [Arabidopsis thaliana] dbj|BAB10690.1| peptidylprolyl isomerase [Arabidopsis thaliana] gb|AED95689.1| peptidylprolyl isomerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidylprolyl isomerase 0.0
Internal
biog2_v2.0_unigene19096 biogeco2 v2.0 500
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat domain-containing protein 0.0
Internal
biog2_v2.0_unigene19179 biogeco2 v2.0 279
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene19545 biogeco2 v2.0 839
AutoFact: Heat shock 70kDa protein 1/8 n=5 Tax=rosids RepID=F4KCE5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock 70kda protein 1 8 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain