Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene13983 biogeco2 v2.0 499
AutoFact: pfam01425, Amidase, Amidase 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amidase family protein 0.0
C-terminus
biog2_v2.0_unigene14045 biogeco2 v2.0 407
AutoFact: putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gb|AAP54456.1| U5 snRNP-associated 102 kDa protein, putative, expressed [Oryza sativa Japonica Group] gb|EAY79087.1| hypothetical protein OsI_34194 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Pre-mRNA splicing factor, putative; Ricinus communis (Castor bean). 0.0
Blast2go: pre-mrna splicing factor 0.0
Internal
biog2_v2.0_unigene14122 biogeco2 v2.0 170
AutoFact: Ethylene-overproduction protein 1 n=5 Tax=Brassicaceae RepID=ETO1_ARATH 0.0
unknown
biog2_v2.0_unigene14132 biogeco2 v2.0 150
AutoFact: T5E21.15 n=1 Tax=Arabidopsis thaliana RepID=Q9MA18_ARATH 1.0e-24
Blast2go: endomembrane protein 70 7.28675e-44
unknown
biog2_v2.0_unigene14152 biogeco2 v2.0 399
AutoFact: PREDICTED: similar to binding n=1 Tax=Vitis vinifera RepID=UPI00019836A8 0.0
Blast2go: tetratricopeptide repeat-containing protein 0.0
unknown
biog2_v2.0_unigene14164 biogeco2 v2.0 352
AutoFact: peptidyl-prolyl cis-trans isomerase SDCCAG10 [Arabidopsis thaliana] gb|AAS75308.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gb|ABF57285.1| At4g33060 [Arabidopsis thaliana] gb|AEE86168.1| peptidyl-prolyl cis-t 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans 0.0
Putative N-terminus
biog2_v2.0_unigene14178 biogeco2 v2.0 158
AutoFact: cleavage stimulation factor 77 [Arabidopsis thaliana] 0.0
Blast2go: plant rna cleavage stimulation 0.0
unknown
biog2_v2.0_unigene14258 biogeco2 v2.0 605
AutoFact: Unassigned protein
Blast2go: tetratricopeptide repeat domain-containing protein 8.01456e-30
Putative coding
biog2_v2.0_unigene14262 biogeco2 v2.0 385
AutoFact: Heat shock cognate 70 kDa protein 2 n=13 Tax=Magnoliophyta RepID=HSP72_ARATH 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock cognate 70 kda protein 2 0.0
N-terminus
biog2_v2.0_unigene14345 biogeco2 v2.0 373
AutoFact: putative TPR-containing nuclear phosphoprotein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna polymerase-associated protein ctr9 homolog 0.0
Internal
biog2_v2.0_unigene14436 biogeco2 v2.0 406
AutoFact: [R] COG0457 FOG: TPR repeat 5.0e-10
Blast2go: protein brushy 0.0
unknown
biog2_v2.0_unigene14473 biogeco2 v2.0 177
AutoFact: putative TPR-containing nuclear phosphoprotein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase-associated protein ctr9 homolog 0.0
C-terminus
biog2_v2.0_unigene14677 biogeco2 v2.0 342
AutoFact: FAP multi-domain protein 8.0e-05
Blast2go: uncharacterized protein loc100809777 7.79977e-41
Coding
biog2_v2.0_unigene14921 biogeco2 v2.0 193
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAL87273.1| unknown protein [Arabidopsis thaliana] gb|AAM45091.1| unknown protein [Arabidopsis thaliana] gb|AEE27668.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana 0.0
Blast2go: at1g04190 0.0
unknown
biog2_v2.0_unigene15179 biogeco2 v2.0 274
AutoFact: peptidyl-prolyl isomerase [Arabidopsis thaliana] sp|Q9LDC0.1|FKB42_ARATH RecName: Full=42 kDa peptidyl-prolyl isomerase; AltName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Protein TWISTED DWARF 1; AltName: Full=Protein ULTRACUR 0.0
Blast2go: 42 kda peptidyl-prolyl isomerase 0.0
unknown
biog2_v2.0_unigene15262 biogeco2 v2.0 383
AutoFact: anaphase-promoting complex subunit 6 [Arabidopsis thaliana] sp|B3DNN5.1|CDC16_ARATH RecName: Full=Anaphase-promoting complex subunit 6; AltName: Full=Cell division cycle protein 16 homolog; Short=CDC16 homolog; AltName: Full=Cyclosome subunit 6; AltName: 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division 0.0
Internal
biog2_v2.0_unigene15349 biogeco2 v2.0 444
AutoFact: DUF1421 multi-domain protein 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein at2g02148-like 0.0
Internal
biog2_v2.0_unigene15407 biogeco2 v2.0 350
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AAK91373.1| AT4g39470/F23K16_100 [Arabidopsis thaliana] gb|AAO42760.1| At4g39470/F23K16_100 [Arabidopsis thaliana] gb|AEE87076.1| tetratricopeptide repeat domain-containing prote 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15479 biogeco2 v2.0 283
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9T299_RICCO 0.0
FL-Next: tr=Kinesin light chain, putative; Ricinus communis (Castor bean). 0.0
Blast2go: tetratricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene15503 biogeco2 v2.0 296
AutoFact: peptidyl-prolyl isomerase [Arabidopsis thaliana] sp|Q9LDC0.1|FKB42_ARATH RecName: Full=42 kDa peptidyl-prolyl isomerase; AltName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Protein TWISTED DWARF 1; AltName: Full=Protein ULTRACUR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 42 kda peptidyl-prolyl isomerase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain