Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene11952 biogeco2 v2.0 163
AutoFact: putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb|A 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: o-linked c transferase like protein 0.0
Internal
biog2_v2.0_unigene12185 biogeco2 v2.0 245
AutoFact: FLU, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flourescent in blue light protein 0.0
Internal
biog2_v2.0_unigene12342 biogeco2 v2.0 325
AutoFact: putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gb|AAP54456.1| U5 snRNP-associated 102 kDa protein, putative, expressed [Oryza sativa Japonica Group] gb|EAY79087.1| hypothetical protein OsI_34194 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Pre-mRNA splicing factor, putative; Ricinus communis (Castor bean). 0.0
Blast2go: pre-mrna splicing factor 0.0
Internal
biog2_v2.0_unigene12369 biogeco2 v2.0 500
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
Coding
biog2_v2.0_unigene12411 biogeco2 v2.0 312
AutoFact: putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: o-linked c transferase like protein 0.0
Internal
biog2_v2.0_unigene12550 biogeco2 v2.0 457
AutoFact: cohesin-load domain-containing protein [Arabidopsis thaliana] dbj|BAB09745.1| unnamed protein product [Arabidopsis thaliana] gb|AED96068.1| cohesin-load domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mau2 chromatid cohesion factor homolog 0.0
Putative C-terminus
biog2_v2.0_unigene12559 biogeco2 v2.0 281
AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SX16_RICCO 0.0
Blast2go: protein 0.0
Putative coding
biog2_v2.0_unigene12601 biogeco2 v2.0 181
AutoFact: FLU, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flourescent in blue light protein 0.0
N-terminus
biog2_v2.0_unigene12683 biogeco2 v2.0 138
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] dbj|BAA98171.1| unnamed protein product [Arabidopsis thaliana] dbj|BAC43609.1| unknown protein [Arabidopsis thaliana] gb|AAO64052.1| unknown protein [Arabidopsis thaliana] gb|AED980 2.0e-18
Blast2go: tpr domain containing protein 0.0
unknown
biog2_v2.0_unigene13240 biogeco2 v2.0 282
AutoFact: putative tetratricopeptide repeat (TPR)-containing protein [Oryza sativa Japonica Group] 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat protein 33-like 0.0
C-terminus
biog2_v2.0_unigene13260 biogeco2 v2.0 636
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: like protein domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene13327 biogeco2 v2.0 203
AutoFact: cleavage stimulation factor 77 [Arabidopsis thaliana] 0.0
Blast2go: plant rna cleavage stimulation 0.0
unknown
biog2_v2.0_unigene13357 biogeco2 v2.0 491
AutoFact: DnaJ protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein dnaj mitochondrial-like 0.0
C-terminus
biog2_v2.0_unigene13504 biogeco2 v2.0 59
AutoFact: Heat shock protein 70 (HSP70)-interacting protein, putative n=1 Tax=Ricinus communis RepID=B9RBP6_RICCO 0.0
Blast2go: heat shock protein sti-like 0.0
unknown
biog2_v2.0_unigene13586 biogeco2 v2.0 302
AutoFact: peptidyl-prolyl isomerase [Arabidopsis thaliana] sp|Q9LDC0.1|FKB42_ARATH RecName: Full=42 kDa peptidyl-prolyl isomerase; AltName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Protein TWISTED DWARF 1; AltName: Full=Protein ULTRACUR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 42 kda peptidyl-prolyl isomerase 0.0
Internal
biog2_v2.0_unigene13690 biogeco2 v2.0 384
AutoFact: NMDA receptor-regulated protein, putative n=1 Tax=Ricinus communis RepID=B9RUV2_RICCO 0.0
FL-Next: tr=Putative N-terminal acetyltransferase; 84330-89402; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog2_v2.0_unigene13744 biogeco2 v2.0 230
AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene13851 biogeco2 v2.0 251
AutoFact: DnaJ protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein dnaj mitochondrial-like 0.0
Internal
biog2_v2.0_unigene13861 biogeco2 v2.0 349
AutoFact: Putative TPR domain containing protein, identical [Solanum demissum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene13956 biogeco2 v2.0 221
AutoFact: putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb|A 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain