Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene10129 biogeco2 v2.0 504
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 7.64789e-17
C-terminus
biog2_v2.0_unigene10203 biogeco2 v2.0 407
• AutoFact: BTB domain containing protein 2.0e-05
• FL-Next: sp=ETO1-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: eto1-like protein 1-like 0.0
N-terminus
biog2_v2.0_unigene10205 biogeco2 v2.0 417
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
• Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene10377 biogeco2 v2.0 282
• AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9RHH9_RICCO 0.0
• Blast2go: tetratricopeptide repeat -containing protein 0.0
unknown
biog2_v2.0_unigene10394 biogeco2 v2.0 388
• AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|ACL13985.1| At5g21990 [Arabidopsis thaliana] gb|AED92964.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene10405 biogeco2 v2.0 385
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead box rna helicase 0.0
Internal
biog2_v2.0_unigene10455 biogeco2 v2.0 563
• AutoFact: E3 ubiquitin-protein ligase CHIP [Arabidopsis thaliana] sp|Q9SRS9.1|CHIP_ARATH RecName: Full=E3 ubiquitin-protein ligase CHIP; AltName: Full=Carboxyl terminus of HSC70-interacting protein; Short=AtCHIP; AltName: Full=Plant U-box protein 61; AltName: Full= 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase chip 0.0
N-terminus
biog2_v2.0_unigene10685 biogeco2 v2.0 598
• AutoFact: Alpha-soluble NSF attachment protein n=2 Tax=Elaeis guineensis RepID=B3TM19_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha-soluble nsf attachment protein 0.0
N-terminus
biog2_v2.0_unigene10779 biogeco2 v2.0 422
• AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AEE27660.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: tetratricopeptide repeat protein 4 homolog 0.0
Internal
biog2_v2.0_unigene10858 biogeco2 v2.0 319
• AutoFact: Tetratricopeptide repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1U9_RICCO 0.0
• FL-Next: tr=Tetratricopeptide repeat protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: tetratricopeptide repeat protein 5-like 0.0
Internal
biog2_v2.0_unigene10876 biogeco2 v2.0 431
• AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SX16_RICCO 0.0
• FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene10911 biogeco2 v2.0 469
• AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kinesin light 0.0
N-terminus
biog2_v2.0_unigene11014 biogeco2 v2.0 139
• AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SX16_RICCO 0.0
• Blast2go: protein 0.0
unknown
biog2_v2.0_unigene11174 biogeco2 v2.0 192
• AutoFact: putative O-linked N-acetyl glucosamine transferase [Oryza sativa Japonica Group] dbj|BAD21878.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa Japonica Group] 0.0
• Blast2go: probable udp-n-acetylglucosamine--peptide n-acetylglucosaminyltransferase sec-like 0.0
unknown
biog2_v2.0_unigene11221 biogeco2 v2.0 231
• AutoFact: Unassigned protein
• Blast2go: protein 0.0
unknown
biog2_v2.0_unigene11301 biogeco2 v2.0 371
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
C-terminus
biog2_v2.0_unigene11432 biogeco2 v2.0 329
• AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] emb|CAB62650.1| MS5-like protein [Arabidopsis thaliana] gb|AAP21246.1| At3g51280 [Arabidopsis thaliana] dbj|BAE99956.1| MS5 like protein [Arabidopsis thaliana] gb|AEE78773.1| tetrat 0.0
• Blast2go: protein 0.0
unknown
biog2_v2.0_unigene11634 biogeco2 v2.0 183
• AutoFact: Isoform 2 of Serine/threonine-protein phosphatase 5 n=1 Tax=Solanum lycopersicum RepID=Q84K11-2 0.0
• Blast2go: serine threonine-protein phosphatase 5 0.0
unknown
biog2_v2.0_unigene11737 biogeco2 v2.0 361
• AutoFact: PREDICTED: similar to binding n=1 Tax=Vitis vinifera RepID=UPI00019836A8 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tetratricopeptide repeat-containing protein 0.0
C-terminus
biog2_v2.0_unigene11841 biogeco2 v2.0 536
• AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9RHH9_RICCO 0.0
• Blast2go: tetratricopeptide repeat -containing protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain