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Assembly Name: biogeco2 v2.0

Name: AMP-dependent synthetase/ligase

Term: IPR000873  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene197 biogeco2 v2.0 484
AutoFact: Acetyl-CoA synthetase, putative; 45051-31547 n=5 Tax=Arabidopsis thaliana RepID=Q9C8A3_ARATH 8.40779e-45
Blast2go: rna polymerase ii transcription mediator 0.0
unknown
biog2_v2.0_unigene440 biogeco2 v2.0 394
AutoFact: Acyl CoA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RZF1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: annotation was added to scaffolds in november 2011~long-chain-fatty-acid- ligase 0.0
Putative C-terminus
biog2_v2.0_unigene597 biogeco2 v2.0 545
AutoFact: microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: microtubule organization protein 0.0
Putative Complete
biog2_v2.0_unigene614 biogeco2 v2.0 495
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amp dependent 0.0
C-terminus
biog2_v2.0_unigene825 biogeco2 v2.0 687
AutoFact: long chain acyl-CoA synthetase 9 [Arabidopsis thaliana] sp|Q9CAP8.1|LACS9_ARATH RecName: Full=Long chain acyl-CoA synthetase 9, chloroplastic gb|AAG51668.1|AC010704_12 putative acyl-CoA synthetase; 62297-59022 [Arabidopsis thaliana] gb|AAM28876.1|AF503759 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: long chain acyl- synthetase 9 0.0
N-terminus
biog2_v2.0_unigene1754 biogeco2 v2.0 524
AutoFact: protein TIFY 6A [Arabidopsis thaliana] sp|Q58G47.1|TIF6A_ARATH RecName: Full=Protein TIFY 6A; AltName: Full=Jasmonate ZIM domain-containing protein 4 gb|AAX55088.1| hypothetical protein At1g48500 [Arabidopsis thaliana] gb|AAZ52705.1| expressed protein [Ar 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene1852 biogeco2 v2.0 938
AutoFact: Acyl-CoA synthetase [Ricinus communis] gb|ABC02881.1| ACS2 [Ricinus communis] gb|EEF45375.1| Acyl-CoA synthetase [Ricinus communis] 0.0
FL-Next: sp=Long chain acyl-CoA synthetase 6, peroxisomal; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: annotation was added to scaffolds in november 2011~long chain fatty acid- ligase 0.0
N-terminus
biog2_v2.0_unigene2027 biogeco2 v2.0 327
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amp dependent 0.0
C-terminus
biog2_v2.0_unigene2065 biogeco2 v2.0 458
AutoFact: acyl-activating enzyme 17 [Arabidopsis thaliana] gb|AED93113.1| acyl-activating enzyme 17 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl-activating enzyme 17 0.0
Internal
biog2_v2.0_unigene2854 biogeco2 v2.0 938
AutoFact: AMP dependent ligase, putative n=1 Tax=Ricinus communis RepID=B9S6X4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amp-binding protein 0.0
C-terminus
biog2_v2.0_unigene3303 biogeco2 v2.0 1211
AutoFact: Long-chain acyl-CoA synthetase 4 n=2 Tax=Ricinus communis RepID=B3TZ27_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: long chain acyl- synthetase 4 0.0
Putative Complete
biog2_v2.0_unigene3600 biogeco2 v2.0 1273
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Blast2go: 4-coumarate: ligase 0.0
C-terminus
biog2_v2.0_unigene3824 biogeco2 v2.0 430
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amp dependent 0.0
Internal
biog2_v2.0_unigene3856 biogeco2 v2.0 492
AutoFact: long chain acyl-CoA synthetase 9 [Arabidopsis thaliana] sp|Q9CAP8.1|LACS9_ARATH RecName: Full=Long chain acyl-CoA synthetase 9, chloroplastic gb|AAG51668.1|AC010704_12 putative acyl-CoA synthetase; 62297-59022 [Arabidopsis thaliana] gb|AAM28876.1|AF503759 0.0
Blast2go: long chain acyl- synthetase 9 0.0
Coding
biog2_v2.0_unigene3894 biogeco2 v2.0 426
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: opc-8:0 ligase1 0.0
N-terminus
biog2_v2.0_unigene4036 biogeco2 v2.0 543
AutoFact: Acyl-CoA synthetase [Ricinus communis] gb|ABC02881.1| ACS2 [Ricinus communis] gb|EEF45375.1| Acyl-CoA synthetase [Ricinus communis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: annotation was added to scaffolds in november 2011~long chain fatty acid- ligase 0.0
C-terminus
biog2_v2.0_unigene4077 biogeco2 v2.0 891
AutoFact: acyl-activating enzyme 18 [Arabidopsis thaliana] gb|AEE33226.1| acyl-activating enzyme 18 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl-activating enzyme 18 0.0
Internal
biog2_v2.0_unigene4281 biogeco2 v2.0 1006
AutoFact: Acyl CoA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RZF1_RICCO 0.0
FL-Next: sp=Long chain acyl-CoA synthetase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: annotation was added to scaffolds in november 2011~long-chain-fatty-acid- ligase 0.0
N-terminus
biog2_v2.0_unigene4476 biogeco2 v2.0 476
AutoFact: Acyl CoA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RZF1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: annotation was added to scaffolds in november 2011~long-chain-fatty-acid- ligase 0.0
Internal
biog2_v2.0_unigene4589 biogeco2 v2.0 824
AutoFact: Long-chain acyl-CoA synthetase 4 n=2 Tax=Ricinus communis RepID=B3TZ27_RICCO 0.0
FL-Next: sp=Long chain acyl-CoA synthetase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: long chain acyl- synthetase 4 0.0
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain