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Assembly Name: biogeco2 v2.0

Name: EF-Hand 1, calcium-binding site

Term: IPR018247  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene13697 biogeco2 v2.0 293
AutoFact: pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein 8.0e-17
Blast2go: sodium calcium exchanger family protein 0.0
unknown
biog2_v2.0_unigene13725 biogeco2 v2.0 418
AutoFact: Cytochrome P450 enzyme n=1 Tax=Pisum sativum RepID=A4PBE8_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
Putative N-terminus
biog2_v2.0_unigene13732 biogeco2 v2.0 190
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
Internal
biog2_v2.0_unigene13773 biogeco2 v2.0 248
AutoFact: RecName: Full=Cytochrome P450 750A1; AltName: Full=Cytochrome P450 CYPC gb|AAX07433.1| cytochrome P450 CYPC [Pinus taeda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 monooxygenase cyp736b 0.0
Internal
biog2_v2.0_unigene13821 biogeco2 v2.0 411
AutoFact: Protein phosphatase 2C n=2 Tax=Physcomitrella patens RepID=B1B5N7_9BRYO 0.0
Blast2go: abscisic acid insensitivity 1b 0.0
unknown
biog2_v2.0_unigene13877 biogeco2 v2.0 340
AutoFact: Glutamate dehydrogenase n=4 Tax=Pinaceae RepID=D9IXC9_PINPS 0.0
FL-Next: tr=Glutamate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
Blast2go: glutamate dehydrogenase 0.0
C-terminus
biog2_v2.0_unigene13939 biogeco2 v2.0 538
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna topoisomerase ii 0.0
N-terminus
biog2_v2.0_unigene13986 biogeco2 v2.0 102
AutoFact: C3HC4-type RING finger-containing protein [Arabidopsis thaliana] gb|AEC09620.1| C3HC4-type RING finger-containing protein [Arabidopsis thaliana] 0.0
Blast2go: inter-alpha-trypsin inhibitor heavy chain h3 0.0
unknown
biog2_v2.0_unigene14023 biogeco2 v2.0 373
AutoFact: ATP-dependent Clp protease ATP-binding subunit precursor [Oryza sativa Indica Group] 0.0
FL-Next: sp=Chaperone protein ClpD, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene14032 biogeco2 v2.0 92
AutoFact: putative Cdc2-related protein kinase CRK2 [Beta vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinase f-4-like 0.0
Internal
biog2_v2.0_unigene14065 biogeco2 v2.0 292
AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML 0.0
Blast2go: ubiquitin-protein pub13 0.0
unknown
biog2_v2.0_unigene14137 biogeco2 v2.0 443
AutoFact: DUF641 multi-domain protein 8.40779e-45
FL-Next: tr=Putative uncharacterized protein At3g60680; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein 0.0
Putative Complete
biog2_v2.0_unigene14168 biogeco2 v2.0 355
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
Blast2go: nac domain ipr003441 0.0
Coding
biog2_v2.0_unigene14220 biogeco2 v2.0 383
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9RWG7_RICCO 1.0e-32
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 5.57889e-36
Putative C-terminus
biog2_v2.0_unigene14224 biogeco2 v2.0 117
AutoFact: Senescence-associated protein n=1 Tax=Elaeis guineensis RepID=B3TLS7_ELAGV 0.0
Blast2go: senescence-associated protein 5 0.0
unknown
biog2_v2.0_unigene14334 biogeco2 v2.0 344
AutoFact: DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial n=4 Tax=Nicotiana RepID=RPO2B_TOBAC 1.4013e-45
FL-Next: sp=DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: phage-type rna polymerase 0.0
Internal
biog2_v2.0_unigene14380 biogeco2 v2.0 608
AutoFact: DUF868 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene14386 biogeco2 v2.0 345
AutoFact: Calcineurin B-like protein 01 n=1 Tax=Selaginella moellendorffii RepID=C4P7X6_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcineurin b-like protein 4 0.0
Putative Complete
biog2_v2.0_unigene14537 biogeco2 v2.0 327
AutoFact: putative nucleoporin PRECOZ [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein Sb01g045670; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: nuclear pore complex protein nup98-nup96 0.0
Internal
biog2_v2.0_unigene14579 biogeco2 v2.0 410
AutoFact: O-FucT domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain