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Assembly Name: biogeco2 v2.0

Name: apoplast

Term: GO:0048046  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene10700 biogeco2 v2.0 433
AutoFact: male sterility 2 (MS2) protein [Arabidopsis thaliana] prf||1916413A male sterility 2 gene 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fatty acyl- reductase 2 0.0
Internal
biog2_v2.0_unigene10708 biogeco2 v2.0 389
AutoFact: [G] COG1472 Beta-glucosidase-related glycosidases 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-xylosidase alpha-l-arabinofuranosidase 2-like 0.0
N-terminus
biog2_v2.0_unigene10729 biogeco2 v2.0 260
AutoFact: serpin-like protein [Citrus x paradisi] 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene10976 biogeco2 v2.0 279
AutoFact: growth-regulating factor 1 [Arabidopsis thaliana] gb|AAC32431.1| unknown protein [Arabidopsis thaliana] gb|AAM52876.1| transcription activator [Arabidopsis thaliana] dbj|BAH30398.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07363.1| growth-regulat 2.8026e-45
Blast2go: transcription activator 0.0
Coding
biog2_v2.0_unigene11012 biogeco2 v2.0 510
AutoFact: alpha-mannosidase [Arabidopsis thaliana] emb|CAA66821.1| alpha-mannosidase [Arabidopsis thaliana] emb|CAA72432.1| alpha-mannosidase precursor [Arabidopsis thaliana] dbj|BAB01735.1| alpha-mannosidase [Arabidopsis thaliana] gb|AAK62592.1| AT3g26720/MLJ15_12 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene11280 biogeco2 v2.0 480
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9SHW1_RICCO 0.0
Blast2go: subtilisin-like protease-like 0.0
unknown
biog2_v2.0_unigene11654 biogeco2 v2.0 333
AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] ref|NP_198485.2| 2-phosphoglycolate phosphatase 1 [Arabidopsis thaliana] ref|NP_001119316.1| 2-phosphoglycolate phosphatase 1 [Arabidopsis thaliana] ref|NP_001119318.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: haloacid dehalogenase-like hydrolase domain-containing protein 0.0
Putative C-terminus
biog2_v2.0_unigene11690 biogeco2 v2.0 415
AutoFact: MRP-like ABC transporter n=2 Tax=Oryza sativa Japonica Group RepID=Q8GU62_ORYSJ 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 3 2.95916e-23
C-terminus
biog2_v2.0_unigene11777 biogeco2 v2.0 194
AutoFact: alanine aminotransferase [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alanine-2-oxoglutarate aminotransferase 2 0.0
Putative Complete
biog2_v2.0_unigene11791 biogeco2 v2.0 387
AutoFact: [G] COG2273 Beta-glucanase/Beta-glucan synthetase 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brassinosteroid-regulated protein bru1-like 0.0
Internal
biog2_v2.0_unigene12123 biogeco2 v2.0 526
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
biog2_v2.0_unigene12438 biogeco2 v2.0 328
AutoFact: OSJNBb0079B02.3 protein n=3 Tax=Oryza sativa RepID=Q7X6F6_ORYSJ 0.0
FL-Next: sp=Beta-D-xylosidase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: beta-xylosidase alpha-l-arabinofuranosidase 2-like 0.0
Internal
biog2_v2.0_unigene12619 biogeco2 v2.0 360
AutoFact: [G] COG1472 Beta-glucosidase-related glycosidases 0.0
FL-Next: sp=Probable beta-D-xylosidase 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: beta-xylosidase alpha-l-arabinofuranosidase 2-like 0.0
Internal
biog2_v2.0_unigene12748 biogeco2 v2.0 400
AutoFact: Monocopper oxidase-like protein SKU5 [Arabidopsis thaliana] ref|NP_001190704.1| Monocopper oxidase-like protein SKU5 [Arabidopsis thaliana] sp|Q9SU40.1|SKU5_ARATH RecName: Full=Monocopper oxidase-like protein SKU5; AltName: Full=Skewed roots; Flags: Precu 0.0
Blast2go: monocopper oxidase-like protein sku5 0.0
unknown
biog2_v2.0_unigene12865 biogeco2 v2.0 508
AutoFact: Malate dehydrogenase n=1 Tax=Pinus pinaster RepID=F4MKL8_PINPS 0.0
Blast2go: mitochondrial nad-dependent malate dehydrogenase 0.0
unknown
biog2_v2.0_unigene12882 biogeco2 v2.0 349
AutoFact: 4-nitrophenylphosphatase, putative n=1 Tax=Ricinus communis RepID=B9RM24_RICCO 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-phosphoglycolate phosphatase 1 0.0
N-terminus
biog2_v2.0_unigene12945 biogeco2 v2.0 214
AutoFact: Triosephosphate isomerase n=1 Tax=Picea sitchensis RepID=A9NRN6_PICSI 0.0
Blast2go: cytosolic triosephosphate isomerase 0.0
unknown
biog2_v2.0_unigene13058 biogeco2 v2.0 348
AutoFact: [G] COG1472 Beta-glucosidase-related glycosidases 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-xylosidase alpha-l-arabinofuranosidase 2-like 0.0
Putative N-terminus
biog2_v2.0_unigene13133 biogeco2 v2.0 243
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
biog2_v2.0_unigene13471 biogeco2 v2.0 221
AutoFact: ATP sulfurylase 1 [Arabidopsis thaliana] sp|Q9LIK9.1|APS1_ARATH RecName: Full=ATP sulfurylase 1, chloroplastic; Short=AtPS1; Flags: Precursor gb|AAK43869.1|AF370492_1 ATP sulfurylase/APS kinase [Arabidopsis thaliana] dbj|BAB03034.1| ATP sulfurylase/APS ki 0.0
FL-Next: sp=ATP sulfurylase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp sulfurylase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain