Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: apoplast

Term: GO:0048046  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene8587 biogeco2 v2.0 646
AutoFact: pfam00656, Peptidase_C14, Caspase domain 9.0e-25
FL-Next: tr=Metacaspase type II; Pinus sylvestris (Scots pine). 0.0
Blast2go: metacaspase 9 0.0
N-terminus
biog2_v2.0_unigene8590 biogeco2 v2.0 216
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
N-terminus
biog2_v2.0_unigene8629 biogeco2 v2.0 1419
AutoFact: Putative ketol-acid reductoisomerase n=1 Tax=Capsicum annuum RepID=B5LAT1_CAPAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ketol-acid reductoisomerase 0.0
C-terminus
biog2_v2.0_unigene8719 biogeco2 v2.0 387
AutoFact: pfam00656, Peptidase_C14, Caspase domain 2.0e-05
FL-Next: tr=Metacaspase type II; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: metacaspase 9 0.0
C-terminus
biog2_v2.0_unigene8978 biogeco2 v2.0 921
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: ribulose bisphosphate small subunit 0.0
Complete
biog2_v2.0_unigene9196 biogeco2 v2.0 361
AutoFact: [G] COG1472 Beta-glucosidase-related glycosidases 0.0
FL-Next: sp=Probable beta-D-xylosidase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: beta-xylosidase alpha-l-arabinofuranosidase 2-like 0.0
Internal
biog2_v2.0_unigene9250 biogeco2 v2.0 434
AutoFact: Alpha-L-arabinofuranosidase n=2 Tax=Fragaria x ananassa RepID=B3F8C4_FRAAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-l-arabinofuranosidase 0.0
Internal
biog2_v2.0_unigene9309 biogeco2 v2.0 625
AutoFact: Monocopper oxidase-like protein SKU5 [Arabidopsis thaliana] ref|NP_001190704.1| Monocopper oxidase-like protein SKU5 [Arabidopsis thaliana] sp|Q9SU40.1|SKU5_ARATH RecName: Full=Monocopper oxidase-like protein SKU5; AltName: Full=Skewed roots; Flags: Precu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: monocopper oxidase-like protein sku5 0.0
Internal
biog2_v2.0_unigene9404 biogeco2 v2.0 458
AutoFact: Beta-glucosidase 40 n=2 Tax=Arabidopsis RepID=BGL40_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-glucosidase 0.0
Internal
biog2_v2.0_unigene9466 biogeco2 v2.0 412
AutoFact: Heat shock cognate 70 kDa protein 2 n=13 Tax=Magnoliophyta RepID=HSP72_ARATH 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.64489e-31
Internal
biog2_v2.0_unigene9473 biogeco2 v2.0 382
AutoFact: Alcohol dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SHB0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: quinone oxidoreductase-like protein chloroplastic-like 0.0
Internal
biog2_v2.0_unigene9639 biogeco2 v2.0 300
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Internal
biog2_v2.0_unigene9673 biogeco2 v2.0 786
AutoFact: Aldose 1-epimerase, putative n=1 Tax=Ricinus communis RepID=B9S6E7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aldose 1-epimerase family protein 0.0
C-terminus
biog2_v2.0_unigene9736 biogeco2 v2.0 381
AutoFact: Translation elongation factor G, putative n=1 Tax=Ricinus communis RepID=B9RBP7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
C-terminus
biog2_v2.0_unigene9762 biogeco2 v2.0 263
AutoFact: ferredoxin-dependent glutamate synthase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferredoxin-dependent glutamate synthase 0.0
Internal
biog2_v2.0_unigene9782 biogeco2 v2.0 858
AutoFact: Periplasmic beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9RJH3_RICCO 0.0
FL-Next: sp=Probable beta-D-xylosidase 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: xylan 1 4-beta-xylosidase 0.0
Internal
biog2_v2.0_unigene9795 biogeco2 v2.0 436
AutoFact: putative acyl-CoA synthetase [Capsicum annuum] 0.0
Blast2go: amp dependent 0.0
unknown
biog2_v2.0_unigene9807 biogeco2 v2.0 723
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Internal
biog2_v2.0_unigene9888 biogeco2 v2.0 371
AutoFact: [G] COG1472 Beta-glucosidase-related glycosidases 0.0
FL-Next: sp=Beta-D-xylosidase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: beta-xylosidase alpha-l-arabinofuranosidase 2-like 0.0
Internal
biog2_v2.0_unigene10439 biogeco2 v2.0 415
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna polymerase epsilon catalytic subunit a 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain