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Assembly Name: biogeco2 v2.0

Name: plant-type cell wall

Term: GO:0009505  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene2468 biogeco2 v2.0 1830
AutoFact: oligosaccharyltransferase complex subunit beta [Arabidopsis thaliana] gb|AAL16268.1|AF428338_1 AT5g66680/MSN2_7 [Arabidopsis thaliana] gb|AAN12926.1| putative dolichyl-di-phosphooligosaccharide glycotransferase (oligosaccharyltransferase) [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kda subunit 0.0
Putative Complete
biog2_v2.0_unigene2558 biogeco2 v2.0 646
AutoFact: ribophorin II (RPN2) family protein [Arabidopsis thaliana] ref|NP_001190785.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gb|AAL24233.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AAL79584.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ribophorin ii family protein 0.0
C-terminus
biog2_v2.0_unigene2642 biogeco2 v2.0 728
AutoFact: phosphorylase family protein [Arabidopsis thaliana] dbj|BAC43650.1| unknown protein [Arabidopsis thaliana] gb|AAO63378.1| At4g24340 [Arabidopsis thaliana] gb|AEE84891.1| phosphorylase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphorylase family protein 0.0
N-terminus
biog2_v2.0_unigene2836 biogeco2 v2.0 861
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] dbj|BAB01710.1| unnamed protein product [Arabidopsis thaliana] gb|AAO64166.1| unknown protein [Arabidopsis thaliana] gb|AAP04069.1| unknown protein [Arabidopsis thaliana] dbj|BAF00437.1| hypotheti 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: o-fucosyltransferase family protein 0.0
N-terminus
biog2_v2.0_unigene2898 biogeco2 v2.0 1154
AutoFact: Monocopper oxidase-like protein SKU5 [Arabidopsis thaliana] ref|NP_001190704.1| Monocopper oxidase-like protein SKU5 [Arabidopsis thaliana] sp|Q9SU40.1|SKU5_ARATH RecName: Full=Monocopper oxidase-like protein SKU5; AltName: Full=Skewed roots; Flags: Precu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: monocopper oxidase-like protein sku5 0.0
N-terminus
biog2_v2.0_unigene2986 biogeco2 v2.0 705
AutoFact: Prohibitin n=4 Tax=core eudicotyledons RepID=O04361_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: prohibitin 0.0
C-terminus
biog2_v2.0_unigene3032 biogeco2 v2.0 891
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
Internal
biog2_v2.0_unigene3236 biogeco2 v2.0 1026
AutoFact: Adenine phosphoribosyltransferase 1 n=1 Tax=Elaeis guineensis RepID=B3TLV7_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adenine phosphoribosyltransferase 1 0.0
Complete
biog2_v2.0_unigene3317 biogeco2 v2.0 1525
AutoFact: DUF642 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein 0.0
Complete
biog2_v2.0_unigene3339 biogeco2 v2.0 1318
AutoFact: protein EXORDIUM like 2 [Arabidopsis thaliana] gb|AAG41473.1|AF326891_1 putative phi-1 protein [Arabidopsis thaliana] gb|AAK00390.1|AF339708_1 putative phi-1 protein [Arabidopsis thaliana] gb|AAK55719.1|AF380638_1 AT5g64260/MSJ1_10 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein exordium like 2 0.0
Complete
biog2_v2.0_unigene3386 biogeco2 v2.0 1756
AutoFact: Protein disulfide isomerase family n=2 Tax=Glycine max RepID=A9CPA7_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein disulfide isomerase family 0.0
Complete
biog2_v2.0_unigene3442 biogeco2 v2.0 549
AutoFact: Peptide deformylase n=1 Tax=Populus trichocarpa RepID=B9GKW9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptide deformylase 1a 0.0
C-terminus
biog2_v2.0_unigene3443 biogeco2 v2.0 1300
AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-processing-splicing factor 8-like 0.0
C-terminus
biog2_v2.0_unigene3602 biogeco2 v2.0 1126
AutoFact: Aquaporin, MIP family, TIP subfamily n=5 Tax=Malpighiales RepID=A9P9G2_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: delta tonoplast intrinsic protein 0.0
Complete
biog2_v2.0_unigene3870 biogeco2 v2.0 1641
AutoFact: Beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9T4F7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-glucosidase 44-like 0.0
Complete
biog2_v2.0_unigene3979 biogeco2 v2.0 284
AutoFact: Auxin-responsive protein IAA7 n=1 Tax=Picea abies RepID=B2KZF8_PICAB 0.0
FL-Next: tr=Auxin-responsive protein IAA7; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome-associated protein 1 0.0
N-terminus
biog2_v2.0_unigene4026 biogeco2 v2.0 268
AutoFact: Glycerophosphoryl diester phosphodiesterase, putative n=1 Tax=Ricinus communis RepID=B9SSQ8_RICCO 0.0
FL-Next: sp=Probable glycerophosphoryl diester phosphodiesterase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glycerophosphoryl diester phosphodiesterase family protein 0.0
Internal
biog2_v2.0_unigene4071 biogeco2 v2.0 629
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] dbj|BAB01710.1| unnamed protein product [Arabidopsis thaliana] gb|AAO64166.1| unknown protein [Arabidopsis thaliana] gb|AAP04069.1| unknown protein [Arabidopsis thaliana] dbj|BAF00437.1| hypotheti 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: o-fucosyltransferase family protein 0.0
C-terminus
biog2_v2.0_unigene4085 biogeco2 v2.0 842
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phagocytic receptor 1b-like 0.0
C-terminus
biog2_v2.0_unigene4335 biogeco2 v2.0 1095
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAD20090.1| putative endosomal protein [Arabidopsis thaliana] gb|AAL24256.1| At2g01970/F14H20.4 [Arabidopsis thaliana] dbj|BAE98629.1| putative endosomal protein [Arabidopsis thaliana] gb|AEC05528 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane 9 superfamily protein member 1 precursor 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain