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Assembly Name: biogeco2 v2.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene46 biogeco2 v2.0 411
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
N-terminus
biog2_v2.0_unigene69 biogeco2 v2.0 1010
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
biog2_v2.0_unigene151 biogeco2 v2.0 2162
AutoFact: Arginine decarboxylase (Fragment) n=1 Tax=Pinus sylvestris RepID=Q71SB4_PINSY 0.0
FL-Next: sp=Arginine decarboxylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine decarboxylase 0.0
C-terminus
biog2_v2.0_unigene248 biogeco2 v2.0 815
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Selaginella moellendorffii RepID=D8REC4_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: 3-ketoacyl- synthase 11-like 0.0
Complete
biog2_v2.0_unigene395 biogeco2 v2.0 606
AutoFact: Shaker-like potassium channel n=4 Tax=Vitis vinifera RepID=Q84LA0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: shaker-like potassium channel 0.0
Internal
biog2_v2.0_unigene399 biogeco2 v2.0 2516
AutoFact: Chloroplast HSP70 n=4 Tax=rosids RepID=A2TJV6_CUCSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: stromal 70 kda heat shock-related chloroplastic-like 0.0
Complete
biog2_v2.0_unigene538 biogeco2 v2.0 1583
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 0.0
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene627 biogeco2 v2.0 120
AutoFact: Serine/threonine-specific protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S9Z6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like serine threonine-protein kinase at5g15730-like 0.0
Internal
biog2_v2.0_unigene824 biogeco2 v2.0 862
AutoFact: ribophorin II (RPN2) family protein [Arabidopsis thaliana] ref|NP_001190785.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana] gb|AAL24233.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AAL79584.1| AT4g21150/F7J7_90 [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribophorin ii family protein 0.0
Putative Complete
biog2_v2.0_unigene894 biogeco2 v2.0 707
AutoFact: sulfite reductase [Nicotiana tabacum] dbj|BAA33796.1| sulfite reductase [Nicotiana tabacum] 0.0
FL-Next: tr=Sulfite reductase; Nicotiana benthamiana. 0.0
Blast2go: sulfite reductase 0.0
C-terminus
biog2_v2.0_unigene922 biogeco2 v2.0 588
AutoFact: Universal stress protein n=1 Tax=Jatropha curcas RepID=D6BRD7_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: universal stress protein family protein 0.0
Complete
biog2_v2.0_unigene1180 biogeco2 v2.0 803
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Vitis vinifera RepID=A5AYN9_VITVI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl-coa synthase family protein 0.0
C-terminus
biog2_v2.0_unigene1254 biogeco2 v2.0 953
AutoFact: Putative serine/threonine kinase n=2 Tax=rosids RepID=Q84U32_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine kinase 0.0
Complete
biog2_v2.0_unigene1262 biogeco2 v2.0 324
AutoFact: MIP-T3 multi-domain protein 8.0e-16
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
unknown
biog2_v2.0_unigene1354 biogeco2 v2.0 1096
AutoFact: uridylyltransferase-related protein [Arabidopsis thaliana] gb|AAF99845.1|AC051629_12 Unknown protein [Arabidopsis thaliana] gb|AAK62433.1|AF386988_1 Unknown protein [Arabidopsis thaliana] gb|AAP13425.1| At1g16880 [Arabidopsis thaliana] gb|AEE29513.1| urid 0.0
FL-Next: sp=Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: uridylyltransferase-related protein 0.0
Complete
biog2_v2.0_unigene1674 biogeco2 v2.0 619
AutoFact: Hydrophobic protein LTI6A, putative 7.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rare cold inducible protein 1.32923e-17
Complete
biog2_v2.0_unigene1685 biogeco2 v2.0 372
AutoFact: Omega-3 fatty acid desaturase, chloroplast n=1 Tax=Arabidopsis thaliana RepID=Q56ZV3_ARATH 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: omega-3 fatty acid desaturase 0.0
C-terminus
biog2_v2.0_unigene1950 biogeco2 v2.0 1893
AutoFact: Phosphoglycerate kinase n=2 Tax=Pinaceae RepID=A9NVA3_PICSI 0.0
FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
Blast2go: phosphoglycerate kinase 0.0
Complete
biog2_v2.0_unigene1970 biogeco2 v2.0 733
AutoFact: Calcineurin B-like protein 01 n=1 Tax=Vitis vinifera RepID=C4P7Y8_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcineurin b-like protein 1 0.0
C-terminus
biog2_v2.0_unigene2077 biogeco2 v2.0 1094
AutoFact: Proteasome subunit alpha type n=1 Tax=Picea sitchensis RepID=A9NPU7_PICSI 0.0
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proteasome subunit alpha type 3 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain