Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene50 biogeco2 v2.0 381
AutoFact: Prp8 binding protein [Arabidopsis thaliana] gb|AAB64029.1| putative splicing factor [Arabidopsis thaliana] gb|AAM13181.1| putative splicing factor [Arabidopsis thaliana] gb|AAP68267.1| At2g43770 [Arabidopsis thaliana] gb|AEC10322.1| Prp8 binding protein [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u5 small nuclear ribonucleoprotein 40 kda 0.0
C-terminus
biog2_v2.0_unigene131 biogeco2 v2.0 354
AutoFact: Bromodomain and WD repeat domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNP7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 yvtn repeat and bromo-wdr9-i-like domain-containing protein 0.0
Internal
biog2_v2.0_unigene144 biogeco2 v2.0 531
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] dbj|BAC42970.1| putative receptor like protein kinase [Arabidopsis thaliana] gb|ACN59402.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AED97645.1| leuci 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding protein 0.0
Putative N-terminus
biog2_v2.0_unigene167 biogeco2 v2.0 1381
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAC42069.1| unknown protein [Arabidopsis thaliana] gb|AEE75401.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Putative Complete
biog2_v2.0_unigene175 biogeco2 v2.0 360
AutoFact: ABC-2 type transporter-like protein [Arabidopsis thaliana] sp|Q9ZUU9.2|AB3G_ARATH RecName: Full=ABC transporter G family member 3; Short=ABC transporter ABCG.3; Short=AtABCG3; AltName: Full=White-brown complex homolog protein 3; Short=AtWBC3 gb|AEC08075.1 1.4013e-45
Blast2go: white-brown-complex abc transporter family 0.0
unknown
biog2_v2.0_unigene205 biogeco2 v2.0 371
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGI2.1|Y1677_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g67720; Flags: Precursor gb|ACN59267.1| leucine-rich repeat receptor-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g67720-like 0.0
Internal
biog2_v2.0_unigene239 biogeco2 v2.0 544
AutoFact: RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] gb|AEE75227.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyadenylate-binding protein 2-a 0.0
C-terminus
biog2_v2.0_unigene251 biogeco2 v2.0 418
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
Blast2go: flowering time control protein 2.21199e-12
unknown
biog2_v2.0_unigene279 biogeco2 v2.0 513
AutoFact: regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti] gb|EAT38683.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti] 4.0e-28
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene337 biogeco2 v2.0 1258
AutoFact: acyl-CoA oxidase [Glycine max] 0.0
FL-Next: sp=Acyl-coenzyme A oxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxisomal acyl- oxidase 1a 0.0
C-terminus
biog2_v2.0_unigene402 biogeco2 v2.0 592
AutoFact: heterogeneous nuclear ribonucleoprotein R [Gallus gallus] ref|XP_003212536.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Meleagris gallopavo] 4.0e-19
FL-Next: tr=Os12g0577100 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein r 0.0
Internal
biog2_v2.0_unigene455 biogeco2 v2.0 905
AutoFact: Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] gb|EAQ39883.1| Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phosphoenolpyruvate carboxykinase 0.0
N-terminus
biog2_v2.0_unigene469 biogeco2 v2.0 818
AutoFact: glutamate-ammonia ligase-like protein [Arabidopsis thaliana] gb|AEE79045.1| glutamate-ammonia ligase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene483 biogeco2 v2.0 516
AutoFact: Rab family protein 3.0e-13
FL-Next: sp=Uncharacterized GTP-binding protein At5g64813; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized gtp-binding protein at5g64813 1.74073e-19
C-terminus
biog2_v2.0_unigene493 biogeco2 v2.0 369
AutoFact: malonyl-CoA decarboxylase [Arabidopsis thaliana] gb|AAP40492.1| putative malonyl-CoA decarboxylase [Arabidopsis thaliana] dbj|BAF01557.1| malonyl-CoA decarboxylase like protein [Arabidopsis thaliana] gb|AEE82377.1| malonyl-CoA decarboxylase [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: malonyl- decarboxylase 0.0
Putative C-terminus
biog2_v2.0_unigene530 biogeco2 v2.0 541
AutoFact: Periodic tryptophan protein-associated region; WD40-like [Medicago truncatula] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: periodic tryptophan protein 2 0.0
N-terminus
biog2_v2.0_unigene564 biogeco2 v2.0 315
AutoFact: Mitogen activated protein kinase kinase kinase-like protein [Arabidopsis thaliana] ref|NP_850718.1| Mitogen activated protein kinase kinase kinase-like protein [Arabidopsis thaliana] gb|AAK83572.1| AT3g58640/F14P22_230 [Arabidopsis thaliana] gb|AAM98106.1 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: mitogen activated protein kinase kinase kinase-like protein 0.0
Internal
biog2_v2.0_unigene655 biogeco2 v2.0 526
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 3 [Arabidopsis thaliana] gb|AAK32926.1|AF367339_1 At2g11520/F14P14.15 [Arabidopsis thaliana] gb|AAD28055.2| putative protein kinase [Arabidopsis thaliana] gb|AAM16251.1| At2g11520/F14P14.15 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene716 biogeco2 v2.0 992
AutoFact: Dynamin related protein 4C [Arabidopsis thaliana] gb|AAB71966.1| similar to 'Mx' GTP-binding proteins [Arabidopsis thaliana] gb|AEE33694.1| Dynamin related protein 4C [Arabidopsis thaliana] 0.0
FL-Next: tr=Dynamin family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: interferon-induced gtp-binding protein mx 0.0
C-terminus
biog2_v2.0_unigene729 biogeco2 v2.0 1369
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SKE9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein q 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain