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Assembly Name: biogeco2 v2.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene8500 biogeco2 v2.0 469
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AEE79079.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd-40 repeat-containing protein 0.0
Putative C-terminus
biog2_v2.0_unigene8600 biogeco2 v2.0 287
AutoFact: putative protein kinase [Arabidopsis thaliana] 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase oxi1-like 0.0
Putative C-terminus
biog2_v2.0_unigene8637 biogeco2 v2.0 585
AutoFact: Pantoate--beta-alanine ligase n=4 Tax=Oryza sativa RepID=PANC_ORYSJ 0.0
FL-Next: sp=Pantoate--beta-alanine ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pantoate-beta-alanine ligase 0.0
C-terminus
biog2_v2.0_unigene8675 biogeco2 v2.0 465
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAC27402.2| expressed protein [Arabidopsis thaliana] gb|AAM65204.1| unknown [Arabidopsis thaliana] dbj|BAC42145.1| unknown protein [Arabidopsis thaliana] gb|AAO63858.1| putative G-protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 55-like 0.0
Internal
biog2_v2.0_unigene8764 biogeco2 v2.0 328
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK76712.1| unknown protein [Arabidopsis thaliana] gb|AAM45004.1| unknown protein [Arabidopsis thaliana] gb|AED97944.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: wd repeat domain-containing protein 83-like 0.0
unknown
biog2_v2.0_unigene8798 biogeco2 v2.0 301
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-08
Blast2go: ctc-interacting domain 11 protein 0.0
Putative coding
biog2_v2.0_unigene8893 biogeco2 v2.0 488
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] ref|NP_001190017.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] emb|CAB82809.1| kinesin-related protein-like [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 125 kda kinesin-related 0.0
Internal
biog2_v2.0_unigene8921 biogeco2 v2.0 430
AutoFact: RecName: Full=125 kDa kinesin-related protein dbj|BAA23159.1| TKRP125 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 125 kda kinesin-related 0.0
Internal
biog2_v2.0_unigene8985 biogeco2 v2.0 322
AutoFact: Ubiquitin-activating enzyme E1, putative n=1 Tax=Ricinus communis RepID=B9STZ8_RICCO 0.0
FL-Next: sp=Adenylyltransferase and sulfurtransferase MOCS3 2; Zea mays (Maize). 0.0
Blast2go: sulfurtransferase mocs3 0.0
Internal
biog2_v2.0_unigene9002 biogeco2 v2.0 646
AutoFact: glycine-rich RNA-binding protein [Physcomitrella patens] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog2_v2.0_unigene9106 biogeco2 v2.0 679
AutoFact: HIV Tat-specific factor 1 [Arabidopsis thaliana] emb|CAC01867.1| putative protein [Arabidopsis thaliana] gb|AAY25436.1| At5g16260 [Arabidopsis thaliana] dbj|BAF01062.1| hypothetical protein [Arabidopsis thaliana] gb|AED92266.1| HIV Tat-specific factor 1 [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hiv tat-specific factor 1 homolog 0.0
N-terminus
biog2_v2.0_unigene9136 biogeco2 v2.0 410
AutoFact: Dihydroorotate dehydrogenase (quinone), mitochondrial n=3 Tax=Arabidopsis RepID=PYRD_ARATH 3.0e-31
Blast2go: dihydroorotate dehydrogenase 6.24232e-35
unknown
biog2_v2.0_unigene9209 biogeco2 v2.0 433
AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
Internal
biog2_v2.0_unigene9246 biogeco2 v2.0 359
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDD1_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene9285 biogeco2 v2.0 351
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6N4_RICCO 0.0
Blast2go: dynamin-like protein c-like 0.0
unknown
biog2_v2.0_unigene9323 biogeco2 v2.0 575
AutoFact: exocyst complex component 5 [Arabidopsis thaliana] ref|NP_568270.3| exocyst complex component 5 [Arabidopsis thaliana] sp|Q8RVQ5.2|EXOC5_ARATH RecName: Full=Exocyst complex component 5; AltName: Full=Exocyst complex component Sec10 dbj|BAD95324.1| putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exocyst complex component 5 0.0
N-terminus
biog2_v2.0_unigene9340 biogeco2 v2.0 213
AutoFact: WD-40 repeat protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
Internal
biog2_v2.0_unigene9364 biogeco2 v2.0 315
AutoFact: putative DNA binding protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding post-transcriptional regulator csx1-like 0.0
Internal
biog2_v2.0_unigene9534 biogeco2 v2.0 362
AutoFact: DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana] sp|P42698.2|DR111_ARATH RecName: Full=DNA-damage-repair/toleration protein DRT111, chloroplastic; Flags: Precursor gb|AAF19751.1|AC009917_10 Strong similarity to gi|1169200 DNA-Damage-Repa 0.0
FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-damage-repair toleration protein drt111 0.0
Putative C-terminus
biog2_v2.0_unigene9658 biogeco2 v2.0 578
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain