|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog2_v2.0_unigene17756
|
biogeco2 v2.0
|
226
|
|
• AutoFact: heterogeneous nuclear ribonucleoprotein R [Gallus gallus] ref|XP_003212536.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Meleagris gallopavo]
|
4.0e-19
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein r
|
0.0
|
|
Coding
|
|
biog2_v2.0_unigene17778
|
biogeco2 v2.0
|
1416
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SM13_VITVI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna binding
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene17780
|
biogeco2 v2.0
|
138
|
|
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: eukaryotic translation initiation factor 3 subunit b-like
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene17795
|
biogeco2 v2.0
|
666
|
|
• AutoFact: Ca(2+)-dependent DNase [Populus tomentosa]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dnase 2
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene17832
|
biogeco2 v2.0
|
496
|
|
• AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ
|
3.00018e-42
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 33 kda chloroplastic-like
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene17867
|
biogeco2 v2.0
|
408
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SM13_VITVI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna binding
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene17873
|
biogeco2 v2.0
|
424
|
|
• AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Putative N-terminus
|
|
biog2_v2.0_unigene17886
|
biogeco2 v2.0
|
348
|
|
• AutoFact: putative arginine/serine-rich splicing factor [Medicago sativa subsp. x varia]
|
0.0
|
|
• Blast2go: splicing arginine serine-rich
|
0.0
|
|
Coding
|
|
biog2_v2.0_unigene17896
|
biogeco2 v2.0
|
915
|
|
• AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: arginine serine-rich-splicing factor rsp40
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene17922
|
biogeco2 v2.0
|
1078
|
|
• AutoFact: THO complex subunit 3 [Arabidopsis thaliana] dbj|BAB09295.1| unnamed protein product [Arabidopsis thaliana] gb|AAM13119.1| unknown protein [Arabidopsis thaliana] gb|AAN15493.1| unknown protein [Arabidopsis thaliana] gb|AED96724.1| THO complex subunit 3 [A
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene17952
|
biogeco2 v2.0
|
126
|
|
• AutoFact: Heterogeneous nuclear ribonucleoprotein A1/A3 n=2 Tax=Arabidopsis RepID=Q9FM47_ARATH
|
7.0e-38
|
|
• Blast2go: rna recognition motif-containing protein
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene18012
|
biogeco2 v2.0
|
84
|
|
• AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL86002.1| unknown protein [Arabidopsis thaliana] gb|AAN71963.1| unknown protein [Arabidopsis thaliana] gb|AEE35239.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: angio-associated migratory cell
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene18035
|
biogeco2 v2.0
|
376
|
|
• AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus]
|
0.0
|
|
• FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene18079
|
biogeco2 v2.0
|
178
|
|
• AutoFact: PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 6 [Canis familiaris]
|
1.0e-05
|
|
• Blast2go: unknown [Picea sitchensis]
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene18128
|
biogeco2 v2.0
|
351
|
|
• AutoFact: phospholipase A-2-activating protein [Arabidopsis thaliana] gb|AAK95297.1|AF410311_1 AT3g18860/MCB22_3 [Arabidopsis thaliana] dbj|BAB03095.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76160.1| phospholipase A-2-activating protein [Arabidopsis t
|
0.0
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: phospholipase a-2-activating protein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene18180
|
biogeco2 v2.0
|
454
|
|
• AutoFact: RRM_1 domain containing protein
|
6.0e-05
|
|
• FL-Next: Isoform 2 of Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica GN=Os03g0328900
|
0.0
|
|
• Blast2go: zinc finger ccch domain-containing protein 18-like
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene18357
|
biogeco2 v2.0
|
418
|
|
• AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: mitogen-activated protein kinase kinase kinase 1-like
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene18433
|
biogeco2 v2.0
|
183
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SM13_VITVI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna binding
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene18449
|
biogeco2 v2.0
|
363
|
|
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB02018.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAL32514.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAM47943.1| WD40-repeat protein [Arabidopsis thaliana] gb|AEE76041.1|
|
0.0
|
|
• FL-Next: tr=Transducin/WD40 domain-containing protein; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: 66 kda stress protein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene18481
|
biogeco2 v2.0
|
80
|
|
• AutoFact: nucleic acid binding protein [Arabidopsis thaliana] ref|NP_001118640.1| nucleic acid binding protein [Arabidopsis thaliana] gb|ABF59160.1| hypothetical protein At3g15605 [Arabidopsis thaliana] gb|AEE75698.1| nucleic acid binding protein [Arabidopsis thali
|
1.0e-16
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
