Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene22 biogeco2 v2.0 917
• AutoFact: Synovial sarcoma associated ss18 protein, putative n=1 Tax=Ricinus communis RepID=B9SVF1_RICCO 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: grf1-interacting factor 3 3.9039e-38
Complete
biog2_v2.0_unigene27 biogeco2 v2.0 380
• AutoFact: chloroplast protein translocon component Tic40 precursor [Pisum sativum] 0.0
• Blast2go: translocon tic40 0.0
unknown
biog2_v2.0_unigene39 biogeco2 v2.0 1052
• AutoFact: Chloroplast sedoheptulose-1,7-bisphosphatase n=1 Tax=Solanum lycopersicum RepID=C5IU71_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: sedoheptulose- -bisphosphatase 0.0
Putative N-terminus
biog2_v2.0_unigene46 biogeco2 v2.0 411
• AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine hydroxymethyltransferase 0.0
N-terminus
biog2_v2.0_unigene65 biogeco2 v2.0 676
• AutoFact: pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alkaline alpha galactosidase 0.0
C-terminus
biog2_v2.0_unigene91 biogeco2 v2.0 433
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TWM5_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene110 biogeco2 v2.0 543
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S925_RICCO 0.0
• Blast2go: probable s-acyltransferase at1g69420-like 0.0
unknown
biog2_v2.0_unigene155 biogeco2 v2.0 780
• AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene157 biogeco2 v2.0 942
• AutoFact: Transcription factor BTF3 homolog (Fragment) n=2 Tax=Picea RepID=O65073_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor 0.0
Complete
biog2_v2.0_unigene183 biogeco2 v2.0 955
• AutoFact: putative COP9 complex subunit 6 [Oryza sativa Japonica Group] emb|CAJ81251.1| COP9 signalosome subunit 6 [Oryza sativa] dbj|BAG86632.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE68946.1| hypothetical protein OsJ_27828 [Oryza sativa Japon 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cop9 signalosome complex subunit 6a 0.0
C-terminus
biog2_v2.0_unigene192 biogeco2 v2.0 449
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
• FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Blast2go: dna damage-binding protein 1a 0.0
C-terminus
biog2_v2.0_unigene210 biogeco2 v2.0 441
• AutoFact: pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1 0.0
• FL-Next: Isoform 3 of Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 0.0
• Blast2go: alkaline alpha galactosidase 0.0
Internal
biog2_v2.0_unigene225 biogeco2 v2.0 962
• AutoFact: Cytochrome b5 isoform Cb5-B n=1 Tax=Vernicia fordii RepID=Q5V9L3_VERFO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome b5 0.0
Complete
biog2_v2.0_unigene248 biogeco2 v2.0 815
• AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Selaginella moellendorffii RepID=D8REC4_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
• Blast2go: 3-ketoacyl- synthase 11-like 0.0
Complete
biog2_v2.0_unigene257 biogeco2 v2.0 363
• AutoFact: Paramyosin, putative n=1 Tax=Ricinus communis RepID=B9R7C9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: uncharacterized protein 0.0
Internal
biog2_v2.0_unigene289 biogeco2 v2.0 652
• AutoFact: Protein kinase [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: shaggy-related protein kinase kappa 0.0
N-terminus
biog2_v2.0_unigene329 biogeco2 v2.0 1337
• AutoFact: putative plastidic ATP/ADP transporter [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastidic atp adp transporter 0.0
C-terminus
biog2_v2.0_unigene348 biogeco2 v2.0 709
• AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin response factor 2 0.0
Putative N-terminus
biog2_v2.0_unigene354 biogeco2 v2.0 479
• AutoFact: FLU, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: flourescent in blue light protein 0.0
C-terminus
biog2_v2.0_unigene366 biogeco2 v2.0 563
• AutoFact: Calmodulin-7 n=219 Tax=Eukaryota RepID=CALM7_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein Sb1599s002010; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: calmodulin 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain