Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: ring u-box domain-containing protein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene731 biogeco3 v1.0 865
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 1.0e-32
• Blast2go: ring u-box domain-containing protein 1.4013e-45
Putative coding
biog3_v1.0_unigene737 biogeco3 v1.0 415
• AutoFact: Zinc finger family protein (Fragment) n=2 Tax=Picea RepID=Q3ZDI3_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
N-terminus
biog3_v1.0_unigene2938 biogeco3 v1.0 1263
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene3046 biogeco3 v1.0 672
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain 7.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Putative Complete
biog3_v1.0_unigene3111 biogeco3 v1.0 781
• AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Complete
biog3_v1.0_unigene3508 biogeco3 v1.0 471
• AutoFact: Unassigned protein
• Blast2go: ring u-box domain-containing protein 0.0
unknown
biog3_v1.0_unigene4006 biogeco3 v1.0 1268
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Putative C-terminus
biog3_v1.0_unigene4240 biogeco3 v1.0 1023
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
N-terminus
biog3_v1.0_unigene5477 biogeco3 v1.0 659
• AutoFact: [K] COG5175 Transcriptional repressor 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Internal
biog3_v1.0_unigene6004 biogeco3 v1.0 527
• AutoFact: Zinc finger family protein (Fragment) n=2 Tax=Picea RepID=Q3ZDI3_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene6367 biogeco3 v1.0 444
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAR92268.1| At1g47570 [Arabidopsis thaliana] gb|AAS99681.1| At1g47570 [Arabidopsis thaliana] gb|AEE32187.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Internal
biog3_v1.0_unigene8686 biogeco3 v1.0 180
• AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 3.0e-23
• Blast2go: ring u-box domain-containing protein 0.0
unknown
biog3_v1.0_unigene9527 biogeco3 v1.0 632
• AutoFact: Zinc finger family protein (Fragment) n=2 Tax=Picea RepID=Q3ZDI3_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Internal
biog3_v1.0_unigene11039 biogeco3 v1.0 716
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAR92268.1| At1g47570 [Arabidopsis thaliana] gb|AAS99681.1| At1g47570 [Arabidopsis thaliana] gb|AEE32187.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein Sb05g004790; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Complete
biog3_v1.0_unigene14324 biogeco3 v1.0 362
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 1.0e-32
• Blast2go: ring u-box domain-containing protein 1.4013e-45
unknown
biog3_v1.0_unigene17798 biogeco3 v1.0 376
• AutoFact: WS00744.C21_P09 WS-PS-N-A-8 Picea glauca cDNA clone WS00744_P09 3, mRNA sequence. 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: ring u-box domain-containing protein 5.16731e-29
Putative N-terminus
biog3_v1.0_unigene18001 biogeco3 v1.0 255
• AutoFact: [K] COG5175 Transcriptional repressor 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene18095 biogeco3 v1.0 123
• AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 3.0e-23
• Blast2go: ring u-box domain-containing protein 0.0
unknown
biog3_v1.0_unigene18305 biogeco3 v1.0 308
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20234.1|AC012395_21 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAV85664.1| At3g07120 [Arabidopsis thaliana] gb|AAW78594.1| At3g07120 [Arabidopsis thaliana] gb|AEE74501.1| R 1.0e-24
• Blast2go: ring u-box domain-containing protein 2.8495e-36
Coding
biog3_v1.0_unigene18800 biogeco3 v1.0 163
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 1.0e-32
• Blast2go: ring u-box domain-containing protein 1.4013e-45
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain