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Assembly Name: biogeco3 v1.0

Name: retrotransposon ty3-gypsy subclass

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene17027 biogeco3 v1.0 154
AutoFact: OSJNBa0024J22.19 protein n=2 Tax=Oryza sativa RepID=Q7XRN3_ORYSJ 0.0
FL-Next: tr=OSJNBa0035O13.13 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 0.0
Internal
biog3_v1.0_unigene18494 biogeco3 v1.0 340
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLX1_ORYSJ 2.0e-14
Blast2go: retrotransposon ty3-gypsy subclass 1.28868e-16
Putative coding
biog3_v1.0_unigene19358 biogeco3 v1.0 161
AutoFact: OSJNBa0009K15.13 protein n=1 Tax=Oryza sativa RepID=Q7XLJ7_ORYSA 5.0e-08
FL-Next: tr=OSJNBa0074B10.8 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 2.28619e-10
Internal
biog3_v1.0_unigene19793 biogeco3 v1.0 168
AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon ty3-gypsy subclass 0.0
Internal
biog3_v1.0_unigene23419 biogeco3 v1.0 367
AutoFact: OSJNBa0024J22.19 protein n=2 Tax=Oryza sativa RepID=Q7XRN3_ORYSJ 0.0
FL-Next: tr=OSJNBa0024J22.19 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain