Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: membrane protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene4561 biogeco3 v1.0 1851
AutoFact: serinc-domain containing protein [Arabidopsis thaliana] ref|NP_001185008.1| serinc-domain containing protein [Arabidopsis thaliana] gb|AAF18512.1|AC010924_25 Contains similarity to gb|AF181686 membrane protein TMS1d from Drosophila melanogaster. ESTs gb|R 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
Complete
biog3_v1.0_unigene6764 biogeco3 v1.0 674
AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
C-terminus
biog3_v1.0_unigene10939 biogeco3 v1.0 533
AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
Internal
biog3_v1.0_unigene14104 biogeco3 v1.0 722
AutoFact: Sad1_UNC domain containing protein 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
Internal
biog3_v1.0_unigene14988 biogeco3 v1.0 379
AutoFact: [S] COG4241 Predicted membrane protein 2.0e-15
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: membrane protein 0.0
N-terminus
biog3_v1.0_unigene18200 biogeco3 v1.0 132
AutoFact: Sad1_UNC domain containing protein 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
Internal
biog3_v1.0_unigene21384 biogeco3 v1.0 215
AutoFact: Ribosome associated membrane protein RAMP4 [Arabidopsis thaliana] ref|NP_564279.1| Ribosome associated membrane protein RAMP4 [Arabidopsis thaliana] ref|XP_002890722.1| hypothetical protein ARALYDRAFT_472929 [Arabidopsis lyrata subsp. lyrata] ref|XP_00289 2.0e-08
Blast2go: membrane protein 9.12863e-16
unknown
biog3_v1.0_unigene25493 biogeco3 v1.0 249
AutoFact: Sad1_UNC domain containing protein 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain