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Assembly Name: biogeco3 v1.0

Name: hydroxyproline-rich glycoprotein family protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene265 biogeco3 v1.0 588
AutoFact: Hydroxyproline-rich glycoprotein family protein n=3 Tax=Arabidopsis RepID=Q9LZ00_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydroxyproline-rich glycoprotein family protein 0.0
Internal
biog3_v1.0_unigene582 biogeco3 v1.0 369
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CRX4_VITVI 4.0e-10
Blast2go: hydroxyproline-rich glycoprotein family protein 1.67071e-10
Coding
biog3_v1.0_unigene4185 biogeco3 v1.0 290
AutoFact: hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] gb|AAM13071.1| unknown protein [Arabidopsis thaliana] gb|AAP68318.1| At4g37130 [Arabidopsis thaliana] gb|AEE86757.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis thalia 2.0e-19
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: hydroxyproline-rich glycoprotein family protein 7.73267e-25
Internal
biog3_v1.0_unigene6044 biogeco3 v1.0 1875
AutoFact: ABI3-interacting protein 2 n=1 Tax=Callitropsis nootkatensis RepID=Q84NF6_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydroxyproline-rich glycoprotein family protein 0.0
Putative Complete
biog3_v1.0_unigene6343 biogeco3 v1.0 1262
AutoFact: pfam05955, Herpes_gp2, Equine herpesvirus glycoprotein gp2 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: hydroxyproline-rich glycoprotein family protein 0.0
Putative C-terminus
biog3_v1.0_unigene14297 biogeco3 v1.0 405
AutoFact: Hydroxyproline-rich glycoprotein-like n=2 Tax=Oryza sativa RepID=Q5JLQ2_ORYSJ 0.0
Blast2go: hydroxyproline-rich glycoprotein family protein 0.0
unknown
biog3_v1.0_unigene21199 biogeco3 v1.0 274
AutoFact: Hydroxyproline-rich glycoprotein-like n=2 Tax=Oryza sativa RepID=Q5JLQ2_ORYSJ 0.0
Blast2go: hydroxyproline-rich glycoprotein family protein 0.0
Coding
biog3_v1.0_unigene26258 biogeco3 v1.0 229
AutoFact: pfam05955, Herpes_gp2, Equine herpesvirus glycoprotein gp2 6.0e-09
Blast2go: hydroxyproline-rich glycoprotein family protein 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain