Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: rna binding protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2918 biogeco3 v1.0 440
AutoFact: ENT domain containing protein 6.0e-12
Blast2go: rna binding protein 1.96821e-13
Coding
biog3_v1.0_unigene3075 biogeco3 v1.0 715
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
biog3_v1.0_unigene6829 biogeco3 v1.0 734
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59923.1| unknown protein [Arabidopsis thaliana] gb|AAM20239.1| unknown protein [Arabidopsis thaliana] gb|AAM62467.1| unkno 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
biog3_v1.0_unigene10348 biogeco3 v1.0 1155
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
N-terminus
biog3_v1.0_unigene15243 biogeco3 v1.0 180
AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] gb|AEE28429.1| agenet domain-containing protein [Arabidopsis thaliana] 7.0e-21
Blast2go: rna binding protein 0.0
unknown
biog3_v1.0_unigene15414 biogeco3 v1.0 400
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S4Q9_RICCO 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 2.12572e-25
Internal
biog3_v1.0_unigene19712 biogeco3 v1.0 308
AutoFact: RNA binding protein [Nicotiana sylvestris] gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
N-terminus
biog3_v1.0_unigene20242 biogeco3 v1.0 306
AutoFact: RNA binding protein n=3 Tax=Andropogoneae RepID=B6TN55_MAIZE 0.0
Blast2go: rna binding protein 0.0
unknown
biog3_v1.0_unigene20613 biogeco3 v1.0 255
AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] gb|AEE28429.1| agenet domain-containing protein [Arabidopsis thaliana] 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Putative N-terminus
biog3_v1.0_unigene20698 biogeco3 v1.0 269
AutoFact: RNA binding protein n=1 Tax=Zea mays RepID=B6T9D3_MAIZE 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 7.34968e-22
C-terminus
biog3_v1.0_unigene24033 biogeco3 v1.0 206
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
Blast2go: rna binding protein 0.0
unknown
biog3_v1.0_unigene24286 biogeco3 v1.0 104
AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] gb|AEE28429.1| agenet domain-containing protein [Arabidopsis thaliana] 7.0e-21
Blast2go: rna binding protein 0.0
unknown
biog3_v1.0_unigene25068 biogeco3 v1.0 63
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59923.1| unknown protein [Arabidopsis thaliana] gb|AAM20239.1| unknown protein [Arabidopsis thaliana] gb|AAM62467.1| unkno 7.0e-21
Blast2go: rna binding protein 0.0
unknown
biog3_v1.0_unigene25692 biogeco3 v1.0 270
AutoFact: OB-fold nucleic acid binding domain-containing protein [Arabidopsis thaliana] gb|AEC09877.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis thaliana] 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain