Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: high mobility group family

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2686 biogeco3 v1.0 780
AutoFact: ARID multi-domain protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Putative N-terminus
biog3_v1.0_unigene2862 biogeco3 v1.0 369
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Internal
biog3_v1.0_unigene4158 biogeco3 v1.0 449
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCQ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
N-terminus
biog3_v1.0_unigene4381 biogeco3 v1.0 474
AutoFact: ARID domain containing protein 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Internal
biog3_v1.0_unigene4448 biogeco3 v1.0 547
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
N-terminus
biog3_v1.0_unigene7383 biogeco3 v1.0 518
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCQ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Internal
biog3_v1.0_unigene9628 biogeco3 v1.0 310
AutoFact: ARID multi-domain protein 2.0e-16
Blast2go: high mobility group family 0.0
unknown
biog3_v1.0_unigene12025 biogeco3 v1.0 1096
AutoFact: High mobility group protein B3 n=2 Tax=Physcomitrella patens RepID=A9Q9L0_9BRYO 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Complete
biog3_v1.0_unigene14045 biogeco3 v1.0 593
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Internal
biog3_v1.0_unigene14620 biogeco3 v1.0 131
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
Blast2go: high mobility group family 0.0
unknown
biog3_v1.0_unigene19836 biogeco3 v1.0 236
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCQ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Putative C-terminus
biog3_v1.0_unigene20939 biogeco3 v1.0 289
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCQ0_RICCO 0.0
Blast2go: high mobility group family 0.0
unknown
biog3_v1.0_unigene20944 biogeco3 v1.0 276
AutoFact: ARID multi-domain protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Internal
biog3_v1.0_unigene22438 biogeco3 v1.0 295
AutoFact: glutathione S-transferase GST 16 - like protein [Oryza sativa Japonica Group] gb|EAZ09947.1| hypothetical protein OsI_32246 [Oryza sativa Indica Group] gb|EAZ45544.1| hypothetical protein OsJ_30204 [Oryza sativa Japonica Group] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 1.4013e-45
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain