Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: methyl binding domain protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2085 biogeco3 v1.0 252
AutoFact: methyl-CPG-binding domain 8 [Arabidopsis thaliana] sp|Q9LME6.1|MBD8_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 8; Short=AtMBD8; Short=MBD08; AltName: Full=Methyl-CpG-binding protein MBD8 gb|AAF87260.1|AC068562_7 Contains a Methyl-CpG 2.0e-06
Blast2go: methyl binding domain protein 3.04398e-14
Putative coding
biog3_v1.0_unigene2702 biogeco3 v1.0 431
AutoFact: methyl-CPG-binding domain protein 5 [Arabidopsis thaliana] sp|Q9SNC0.1|MBD5_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 5; Short=AtMBD5; Short=MBD05; AltName: Full=Methyl-CpG-binding protein MBD5 emb|CAB62328.1| putative protein [Arab 1.0e-13
Blast2go: methyl binding domain protein 7.83685e-20
Coding
biog3_v1.0_unigene5723 biogeco3 v1.0 374
AutoFact: putative methyl-binding domain protein [Cryptomeria japonica] 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl binding domain protein 3.71356e-20
N-terminus
biog3_v1.0_unigene6525 biogeco3 v1.0 482
AutoFact: methyl-CPG-binding domain 8 [Arabidopsis thaliana] gb|AAL86338.1| unknown protein [Arabidopsis thaliana] gb|AAM91660.1| unknown protein [Arabidopsis thaliana] gb|AEE30228.1| methyl-CPG-binding domain 8 [Arabidopsis thaliana] 2.0e-21
FL-Next: Isoform 2 of Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 0.0
Blast2go: methyl binding domain protein 8.40779e-45
Internal
biog3_v1.0_unigene8357 biogeco3 v1.0 422
AutoFact: methyl-CPG-binding domain 8 [Arabidopsis thaliana] sp|Q9LME6.1|MBD8_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 8; Short=AtMBD8; Short=MBD08; AltName: Full=Methyl-CpG-binding protein MBD8 gb|AAF87260.1|AC068562_7 Contains a Methyl-CpG 2.0e-06
Blast2go: methyl binding domain protein 3.04398e-14
Coding
biog3_v1.0_unigene9332 biogeco3 v1.0 209
AutoFact: methyl-CPG-binding domain 8 [Arabidopsis thaliana] gb|AAL86338.1| unknown protein [Arabidopsis thaliana] gb|AAM91660.1| unknown protein [Arabidopsis thaliana] gb|AEE30228.1| methyl-CPG-binding domain 8 [Arabidopsis thaliana] 2.0e-21
Blast2go: methyl binding domain protein 8.40779e-45
Coding
biog3_v1.0_unigene13338 biogeco3 v1.0 307
AutoFact: putative methyl-binding domain protein [Cryptomeria japonica] 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl binding domain protein 3.71356e-20
Internal
biog3_v1.0_unigene13771 biogeco3 v1.0 420
AutoFact: methyl-CPG-binding domain 8 [Arabidopsis thaliana] sp|Q9LME6.1|MBD8_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 8; Short=AtMBD8; Short=MBD08; AltName: Full=Methyl-CpG-binding protein MBD8 gb|AAF87260.1|AC068562_7 Contains a Methyl-CpG 2.0e-06
FL-Next: sp=Methyl-CpG-binding domain-containing protein 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 3.04398e-14
N-terminus
biog3_v1.0_unigene18565 biogeco3 v1.0 163
AutoFact: methyl-CPG-binding domain protein 5 [Arabidopsis thaliana] sp|Q9SNC0.1|MBD5_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 5; Short=AtMBD5; Short=MBD05; AltName: Full=Methyl-CpG-binding protein MBD5 emb|CAB62328.1| putative protein [Arab 1.0e-13
Blast2go: methyl binding domain protein 7.83685e-20
unknown
biog3_v1.0_unigene19127 biogeco3 v1.0 175
AutoFact: methyl-CPG-binding domain 8 [Arabidopsis thaliana] gb|AAL86338.1| unknown protein [Arabidopsis thaliana] gb|AAM91660.1| unknown protein [Arabidopsis thaliana] gb|AEE30228.1| methyl-CPG-binding domain 8 [Arabidopsis thaliana] 2.0e-21
Blast2go: methyl binding domain protein 8.40779e-45
unknown
biog3_v1.0_unigene21718 biogeco3 v1.0 399
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 0.0
Blast2go: methyl binding domain protein 2.07723e-35
Internal
biog3_v1.0_unigene22810 biogeco3 v1.0 348
AutoFact: Unassigned protein
Blast2go: methyl binding domain protein 2.07723e-35
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain