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Assembly Name: biogeco3 v1.0

Name: nucleosome chromatin assembly factor group

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene347 biogeco3 v1.0 283
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Putative N-terminus
biog3_v1.0_unigene4105 biogeco3 v1.0 342
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Internal
biog3_v1.0_unigene5891 biogeco3 v1.0 1500
AutoFact: FVE n=2 Tax=Papilionoideae RepID=Q52ZH8_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Complete
biog3_v1.0_unigene6276 biogeco3 v1.0 619
AutoFact: pfam10537, WAC_Acf1_DNA_bd, ATP-utilising chromatin assembly and remodelling N-terminal 3.0e-34
FL-Next: tr=ATP-dependent chromatin assembly factor; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
N-terminus
biog3_v1.0_unigene9090 biogeco3 v1.0 283
AutoFact: pfam10537, WAC_Acf1_DNA_bd, ATP-utilising chromatin assembly and remodelling N-terminal 3.0e-34
Blast2go: nucleosome chromatin assembly factor group 0.0
Putative coding
biog3_v1.0_unigene15236 biogeco3 v1.0 477
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
C-terminus
biog3_v1.0_unigene16048 biogeco3 v1.0 398
AutoFact: FVE n=2 Tax=Papilionoideae RepID=Q52ZH8_PEA 0.0
FL-Next: sp=WD-40 repeat-containing protein MSI4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Putative N-terminus
biog3_v1.0_unigene18059 biogeco3 v1.0 119
AutoFact: pfam10537, WAC_Acf1_DNA_bd, ATP-utilising chromatin assembly and remodelling N-terminal 3.0e-34
Blast2go: nucleosome chromatin assembly factor group 0.0
unknown
biog3_v1.0_unigene20394 biogeco3 v1.0 474
AutoFact: DDT domain-containing protein [Arabidopsis thaliana] gb|AED91331.1| DDT domain-containing protein [Arabidopsis thaliana] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Internal
biog3_v1.0_unigene23038 biogeco3 v1.0 153
AutoFact: pfam10537, WAC_Acf1_DNA_bd, ATP-utilising chromatin assembly and remodelling N-terminal 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Internal
biog3_v1.0_unigene25811 biogeco3 v1.0 346
AutoFact: nucleosome chromatin assembly protein [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain