Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: pentatricopeptide repeat-containing protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene186 biogeco3 v1.0 370
AutoFact: puative protein [Arabidopsis thaliana] emb|CAB79800.1| puative protein [Arabidopsis thaliana] 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene736 biogeco3 v1.0 835
AutoFact: proteinaceous RNase P 1 [Arabidopsis thaliana] sp|Q66GI4.1|PP179_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Flags: Precursor gb|AAU05541.1| At2g32230 [Arabidopsis thaliana] gb|AEC08652.1| proteinaceous RNase 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene970 biogeco3 v1.0 291
AutoFact: Malic enzyme n=1 Tax=Picea sitchensis RepID=B8LMR7_PICSI 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative coding
biog3_v1.0_unigene1032 biogeco3 v1.0 477
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene1138 biogeco3 v1.0 551
AutoFact: glutamine-rich protein 23 [Arabidopsis thaliana] sp|Q9SY69.1|PPR29_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g10270; AltName: Full=Protein GLUTAMINE-RICH PROTEIN 23 gb|AAD32877.1|AC005489_15 F14N23.15 [Arabidopsis thaliana] gb|AEE 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.52015e-34
Putative N-terminus
biog3_v1.0_unigene1240 biogeco3 v1.0 493
AutoFact: Unassigned protein
FL-Next: sp=Pentatricopeptide repeat-containing protein At5g04810, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.94502e-32
C-terminus
biog3_v1.0_unigene1446 biogeco3 v1.0 541
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SQC8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene1529 biogeco3 v1.0 576
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T3G5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene2046 biogeco3 v1.0 584
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized protein At3g49140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene2274 biogeco3 v1.0 558
AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
biog3_v1.0_unigene2305 biogeco3 v1.0 817
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g18900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
biog3_v1.0_unigene2387 biogeco3 v1.0 442
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S7Q8_RICCO 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.56438e-43
Internal
biog3_v1.0_unigene2472 biogeco3 v1.0 474
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
biog3_v1.0_unigene2633 biogeco3 v1.0 358
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPI6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene2775 biogeco3 v1.0 456
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.87148e-14
Internal
biog3_v1.0_unigene3196 biogeco3 v1.0 341
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene3441 biogeco3 v1.0 332
AutoFact: pfam12854, PPR_1, PPR repeat 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene3824 biogeco3 v1.0 153
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EEE56247.1| hypothetical protein OsJ_05263 [Oryza sativa Japonica Group] 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
unknown
biog3_v1.0_unigene3853 biogeco3 v1.0 438
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
biog3_v1.0_unigene3969 biogeco3 v1.0 429
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810 emb|CAB87909.1| putative protein [Arabidopsis thaliana] gb|AEE78458.1| pentatricopeptide repeat- 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 7.61562e-22
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain