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Assembly Name: biogeco3 v1.0

Name: Elongator protein 3/MiaB/NifB

Term: IPR006638  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1206 biogeco3 v1.0 487
AutoFact: UPF0004 multi-domain protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: cdk5 regulatory subunit-associated protein 1-like 1-like 0.0
Internal
biog3_v1.0_unigene2871 biogeco3 v1.0 929
AutoFact: UPF0004 multi-domain protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cdk5 regulatory subunit-associated protein 1-like 1-like 0.0
Putative N-terminus
biog3_v1.0_unigene2937 biogeco3 v1.0 388
AutoFact: metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gb|AAK63855.1|AF389282_1 AT5g40270/MSN9_170 [Arabidopsis thaliana] dbj|BAB10908.1| unnamed protein product [Arabidopsis thaliana] gb|AAM26721.1| AT5g40270/MSN9_170 [Arabi 0.0
FL-Next: tr=Catalytic, putative; Ricinus communis (Castor bean). 0.0
Blast2go: metal-dependent phosphohydrolase hd domain-containing protein 0.0
Internal
biog3_v1.0_unigene4248 biogeco3 v1.0 1598
AutoFact: biotin synthase [Brassica rapa subsp. pekinensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: biotin synthase 0.0
Complete
biog3_v1.0_unigene6289 biogeco3 v1.0 596
AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] gb|AAM10038.1| unknown protein [Arabidopsis thaliana] gb|AEE33668.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: radical sam domain-containing protein 0.0
Putative C-terminus
biog3_v1.0_unigene6992 biogeco3 v1.0 414
AutoFact: Lipoyl synthase, mitochondrial n=1 Tax=Picea sitchensis RepID=LIAS_PICSI 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipoic acid synthase 0.0
C-terminus
biog3_v1.0_unigene7940 biogeco3 v1.0 394
AutoFact: metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gb|AAK63855.1|AF389282_1 AT5g40270/MSN9_170 [Arabidopsis thaliana] dbj|BAB10908.1| unnamed protein product [Arabidopsis thaliana] gb|AAM26721.1| AT5g40270/MSN9_170 [Arabi 0.0
FL-Next: tr=Putative metal-dependent phosphohydrolase; Phaseolus vulgaris (Kidney bean) (French bean). 0.0
Blast2go: metal-dependent phosphohydrolase hd domain-containing protein 0.0
Internal
biog3_v1.0_unigene7997 biogeco3 v1.0 468
AutoFact: Elongator complex protein 3 n=16 Tax=Magnoliophyta RepID=ELP3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
Internal
biog3_v1.0_unigene8829 biogeco3 v1.0 476
AutoFact: Similar to CDK5 regulatory subunit-associated protein n=1 Tax=Nicotiana tabacum RepID=Q75WU8_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene8832 biogeco3 v1.0 363
AutoFact: lipoyl synthase [Arabidopsis thaliana] sp|Q8LEE8.2|LISC_ARATH RecName: Full=Lipoyl synthase, chloroplastic; AltName: Full=Lipoate synthase; Short=LS; Short=Lip-syn; AltName: Full=Lipoate synthase, plastidial; Short=LIP1p; AltName: Full=Lipoic acid synthas 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene9417 biogeco3 v1.0 1315
AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAO41968.1| unknown protein [Arabidopsis thaliana] gb|AAO50541.1| unknown protein [Arabidopsis thaliana] gb|AEE76269.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal rna large subunit methyltransferase n 0.0
Complete
biog3_v1.0_unigene9614 biogeco3 v1.0 269
AutoFact: lipoyl synthase [Arabidopsis thaliana] sp|Q8LEE8.2|LISC_ARATH RecName: Full=Lipoyl synthase, chloroplastic; AltName: Full=Lipoate synthase; Short=LS; Short=Lip-syn; AltName: Full=Lipoate synthase, plastidial; Short=LIP1p; AltName: Full=Lipoic acid synthas 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene10786 biogeco3 v1.0 441
AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] gb|AAM10038.1| unknown protein [Arabidopsis thaliana] gb|AEE33668.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: radical sam domain-containing protein 0.0
Internal
biog3_v1.0_unigene13121 biogeco3 v1.0 504
AutoFact: Lipoyl synthase, mitochondrial n=1 Tax=Picea sitchensis RepID=LIAS_PICSI 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipoic acid synthase 0.0
Internal
biog3_v1.0_unigene13334 biogeco3 v1.0 441
AutoFact: Similar to CDK5 regulatory subunit-associated protein n=1 Tax=Nicotiana tabacum RepID=Q75WU8_TOBAC 0.0
FL-Next: sp=CDK5RAP1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene13733 biogeco3 v1.0 302
AutoFact: Elongator complex protein 3 n=16 Tax=Magnoliophyta RepID=ELP3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
Internal
biog3_v1.0_unigene15321 biogeco3 v1.0 316
AutoFact: Similar to CDK5 regulatory subunit-associated protein n=1 Tax=Nicotiana tabacum RepID=Q75WU8_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene15951 biogeco3 v1.0 305
AutoFact: oxygen-independent coproporphyrinogen III oxidase [Arabidopsis thaliana] dbj|BAB10571.1| oxygen-independent coproporphyrinogen-like protein [Arabidopsis thaliana] gb|ABI93924.1| At5g63290 [Arabidopsis thaliana] gb|AED97728.1| oxygen-independent coproporph 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: oxygen-independent coproporphyrinogen iii oxidase 0.0
Internal
biog3_v1.0_unigene17980 biogeco3 v1.0 283
AutoFact: Lipoyl synthase, mitochondrial n=1 Tax=Picea sitchensis RepID=LIAS_PICSI 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipoic acid synthase 0.0
Putative N-terminus
biog3_v1.0_unigene19750 biogeco3 v1.0 267
AutoFact: metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gb|AAK63855.1|AF389282_1 AT5g40270/MSN9_170 [Arabidopsis thaliana] dbj|BAB10908.1| unnamed protein product [Arabidopsis thaliana] gb|AAM26721.1| AT5g40270/MSN9_170 [Arabi 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: metal-dependent phosphohydrolase hd domain-containing protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain