Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: TRAM domain

Term: IPR002792  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1206 biogeco3 v1.0 487
AutoFact: UPF0004 multi-domain protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: cdk5 regulatory subunit-associated protein 1-like 1-like 0.0
Internal
biog3_v1.0_unigene2871 biogeco3 v1.0 929
AutoFact: UPF0004 multi-domain protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cdk5 regulatory subunit-associated protein 1-like 1-like 0.0
Putative N-terminus
biog3_v1.0_unigene7508 biogeco3 v1.0 1001
AutoFact: receptor kinase-like protein [Arabidopsis thaliana] emb|CAB80391.1| receptor kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at4g37250-like 0.0
Putative N-terminus
biog3_v1.0_unigene8213 biogeco3 v1.0 518
AutoFact: receptor kinase-like protein [Arabidopsis thaliana] emb|CAB80391.1| receptor kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at4g37250-like 0.0
Internal
biog3_v1.0_unigene8829 biogeco3 v1.0 476
AutoFact: Similar to CDK5 regulatory subunit-associated protein n=1 Tax=Nicotiana tabacum RepID=Q75WU8_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene13334 biogeco3 v1.0 441
AutoFact: Similar to CDK5 regulatory subunit-associated protein n=1 Tax=Nicotiana tabacum RepID=Q75WU8_TOBAC 0.0
FL-Next: sp=CDK5RAP1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene15321 biogeco3 v1.0 316
AutoFact: Similar to CDK5 regulatory subunit-associated protein n=1 Tax=Nicotiana tabacum RepID=Q75WU8_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene15415 biogeco3 v1.0 320
AutoFact: RNA methyltransferase family protein [Arabidopsis thaliana] dbj|BAB01724.1| RNA methyltransferase-like protein [Arabidopsis thaliana] gb|AEE76490.1| RNA methyltransferase family protein [Arabidopsis thaliana] 0.0
Blast2go: rna methyltransferase family protein 0.0
unknown
biog3_v1.0_unigene19427 biogeco3 v1.0 152
AutoFact: receptor kinase-like protein [Arabidopsis thaliana] emb|CAB80391.1| receptor kinase-like protein [Arabidopsis thaliana] 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at4g37250-like 0.0
unknown
biog3_v1.0_unigene21600 biogeco3 v1.0 327
AutoFact: receptor kinase-like protein [Arabidopsis thaliana] emb|CAB80391.1| receptor kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at4g37250-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain