Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: 5'-3' exoribonuclease 2

Term: IPR017151  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene766 biogeco3 v1.0 759
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
N-terminus
biog3_v1.0_unigene1262 biogeco3 v1.0 358
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH 0.0
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene3366 biogeco3 v1.0 413
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Internal
biog3_v1.0_unigene8154 biogeco3 v1.0 219
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Internal
biog3_v1.0_unigene10570 biogeco3 v1.0 1095
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog3_v1.0_unigene10790 biogeco3 v1.0 763
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 5 -3 exoribonuclease 3-like 0.0
Putative N-terminus
biog3_v1.0_unigene14872 biogeco3 v1.0 319
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH 0.0
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene16585 biogeco3 v1.0 267
• AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 0.0
• Blast2go: 5 -3 exoribonuclease 3-like 0.0
Coding
biog3_v1.0_unigene19548 biogeco3 v1.0 297
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Internal
biog3_v1.0_unigene22799 biogeco3 v1.0 161
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Internal
biog3_v1.0_unigene23887 biogeco3 v1.0 372
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog3_v1.0_unigene24830 biogeco3 v1.0 826
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
biog3_v1.0_unigene26165 biogeco3 v1.0 229
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 5 -3 exoribonuclease 3-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain