|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene766
|
biogeco3 v1.0
|
759
|
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene1262
|
biogeco3 v1.0
|
358
|
|
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH
|
0.0
|
|
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3366
|
biogeco3 v1.0
|
413
|
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene8154
|
biogeco3 v1.0
|
219
|
|
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH
|
0.0
|
|
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene10570
|
biogeco3 v1.0
|
1095
|
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene10790
|
biogeco3 v1.0
|
763
|
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 5 -3 exoribonuclease 3-like
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene13086
|
biogeco3 v1.0
|
1245
|
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene14215
|
biogeco3 v1.0
|
329
|
|
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene14872
|
biogeco3 v1.0
|
319
|
|
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH
|
0.0
|
|
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene15071
|
biogeco3 v1.0
|
260
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene16585
|
biogeco3 v1.0
|
267
|
|
• AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ
|
0.0
|
|
• Blast2go: 5 -3 exoribonuclease 3-like
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene18432
|
biogeco3 v1.0
|
321
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE
|
3.0e-24
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: reverse transcriptase
|
1.49367e-26
|
|
Internal
|
|
biog3_v1.0_unigene18808
|
biogeco3 v1.0
|
417
|
|
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene19548
|
biogeco3 v1.0
|
297
|
|
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH
|
0.0
|
|
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene22300
|
biogeco3 v1.0
|
273
|
|
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene22799
|
biogeco3 v1.0
|
161
|
|
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH
|
0.0
|
|
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene23887
|
biogeco3 v1.0
|
372
|
|
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene24519
|
biogeco3 v1.0
|
262
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene24618
|
biogeco3 v1.0
|
179
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE
|
6.0e-23
|
|
• Blast2go: reverse transcriptase
|
3.67401e-30
|
|
unknown
|
|
biog3_v1.0_unigene24830
|
biogeco3 v1.0
|
826
|
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
N-terminus
|
