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Assembly Name: biogeco3 v1.0

Name: RNA polymerase sigma-70 factor

Term: IPR000943  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene84 biogeco3 v1.0 215
• AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
• FL-Next: sp=DNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: dna polymerase epsilon catalytic subunit a 0.0
Internal
biog3_v1.0_unigene5915 biogeco3 v1.0 676
• AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna sigma 70 subfamily 0.0
N-terminus
biog3_v1.0_unigene6905 biogeco3 v1.0 560
• AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna polymerase sigma factor rpod-like 0.0
Internal
biog3_v1.0_unigene9140 biogeco3 v1.0 220
• AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
• Blast2go: rna sigma 70 subfamily 0.0
unknown
biog3_v1.0_unigene9416 biogeco3 v1.0 281
• AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: rna polymerase sigma factor rpod-like 0.0
Internal
biog3_v1.0_unigene11276 biogeco3 v1.0 845
• AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna sigma 70 subfamily 0.0
Putative C-terminus
biog3_v1.0_unigene14945 biogeco3 v1.0 222
• AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna sigma 70 subfamily 0.0
Internal
biog3_v1.0_unigene16063 biogeco3 v1.0 275
• AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
• Blast2go: rna polymerase sigma factor rpod-like 0.0
Putative coding
biog3_v1.0_unigene17261 biogeco3 v1.0 328
• AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
• FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: dna polymerase epsilon catalytic subunit a 0.0
Internal
biog3_v1.0_unigene19684 biogeco3 v1.0 147
• AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
• FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: dna polymerase epsilon catalytic subunit a 0.0
Internal
biog3_v1.0_unigene20073 biogeco3 v1.0 313
• AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna sigma 70 subfamily 0.0
Internal
biog3_v1.0_unigene25598 biogeco3 v1.0 443
• AutoFact: DNA polymerase n=2 Tax=Oryza sativa RepID=Q6K777_ORYSJ 0.0
• FL-Next: sp=DNA polymerase; Oryza sativa subsp. indica (Rice). 0.0
• Blast2go: dna polymerase epsilon catalytic subunit a 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain