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Assembly Name: biogeco3 v1.0

Name: Polysaccharide lyase 8, N-terminal alpha-helical

Term: IPR012970  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2243 biogeco3 v1.0 530
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aaa-type atpase family protein 0.0
Internal
biog3_v1.0_unigene4231 biogeco3 v1.0 802
AutoFact: Cell division protein ftsH, putative n=1 Tax=Ricinus communis RepID=B9RQG8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: like protein 0.0
Putative N-terminus
biog3_v1.0_unigene4983 biogeco3 v1.0 331
AutoFact: Cell division protein ftsH, putative n=1 Tax=Ricinus communis RepID=B9SHY4_RICCO 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic-like 0.0
unknown
biog3_v1.0_unigene5117 biogeco3 v1.0 413
AutoFact: ATP-dependent peptidase, putative n=1 Tax=Ricinus communis RepID=B9RIL2_RICCO 0.0
FL-Next: sp=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
Internal
biog3_v1.0_unigene6944 biogeco3 v1.0 519
AutoFact: ATP-dependent peptidase, putative n=1 Tax=Ricinus communis RepID=B9RIL2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
Internal
biog3_v1.0_unigene7668 biogeco3 v1.0 601
AutoFact: Cell division protein ftsH, putative n=1 Tax=Ricinus communis RepID=B9SHY4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic-like 0.0
Internal
biog3_v1.0_unigene13821 biogeco3 v1.0 418
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
Blast2go: aaa-type atpase family protein 0.0
unknown
biog3_v1.0_unigene14002 biogeco3 v1.0 209
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: aaa-type atpase family protein 0.0
Internal
biog3_v1.0_unigene15133 biogeco3 v1.0 241
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: aaa-type atpase family protein 0.0
Internal
biog3_v1.0_unigene17015 biogeco3 v1.0 312
AutoFact: ATP-dependent peptidase, putative n=1 Tax=Ricinus communis RepID=B9RIL2_RICCO 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like 0.0
Putative coding
biog3_v1.0_unigene17734 biogeco3 v1.0 242
AutoFact: Cell division protein ftsH, putative n=1 Tax=Ricinus communis RepID=B9SHY4_RICCO 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic-like 0.0
Putative coding
biog3_v1.0_unigene18650 biogeco3 v1.0 135
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
Blast2go: aaa-type atpase family protein 0.0
unknown
biog3_v1.0_unigene19255 biogeco3 v1.0 205
AutoFact: putative zinc dependent protease [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene19917 biogeco3 v1.0 256
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: sp=ATP-dependent zinc metalloprotease FtsH; Cyanidium caldarium. Plastid; Chloroplast. 0.0
Blast2go: aaa-type atpase family protein 0.0
Internal
biog3_v1.0_unigene20817 biogeco3 v1.0 362
AutoFact: Cell division protein ftsH, putative n=1 Tax=Ricinus communis RepID=B9SHY4_RICCO 0.0
Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic-like 0.0
Putative coding
biog3_v1.0_unigene23261 biogeco3 v1.0 216
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
Blast2go: aaa-type atpase family protein 0.0
unknown
biog3_v1.0_unigene23358 biogeco3 v1.0 183
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AED97923.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: aaa-type atpase family protein 0.0
Putative N-terminus
biog3_v1.0_unigene25414 biogeco3 v1.0 190
AutoFact: FtsH extracellular protease [Arabidopsis thaliana] gb|AAB63626.1| cell division protein isolog [Arabidopsis thaliana] emb|CAB43894.1| cell division protein-like [Arabidopsis thaliana] emb|CAB81312.1| cell division protein-like [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cell division protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain