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Assembly Name: biogeco3 v1.0

Name: ABC transporter, transmembrane domain

Term: IPR001140  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene750 biogeco3 v1.0 456
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
Putative C-terminus
biog3_v1.0_unigene1258 biogeco3 v1.0 484
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
FL-Next: sp=ABC transporter B family member 25, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
N-terminus
biog3_v1.0_unigene1312 biogeco3 v1.0 307
AutoFact: ABC transporter B family member 19 n=5 Tax=Camelineae RepID=AB19B_ARATH 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Internal
biog3_v1.0_unigene1324 biogeco3 v1.0 321
AutoFact: putative ABC transporter [Hordeum vulgare subsp. vulgare] 0.0
FL-Next: sp=ABC transporter B family member 27; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter family protein 0.0
Internal
biog3_v1.0_unigene1480 biogeco3 v1.0 355
AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
Putative C-terminus
biog3_v1.0_unigene1783 biogeco3 v1.0 296
AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug resistance protein 0.0
Internal
biog3_v1.0_unigene2126 biogeco3 v1.0 496
AutoFact: SAND family protein [Arabidopsis thaliana] gb|AAL10492.1| At2g28390/T1B3.9 [Arabidopsis thaliana] gb|AAD20687.2| expressed protein [Arabidopsis thaliana] gb|AAM91354.1| At2g28390/T1B3.9 [Arabidopsis thaliana] dbj|BAC42668.1| unknown protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sand family protein 0.0
Internal
biog3_v1.0_unigene2339 biogeco3 v1.0 327
AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9IB53_POPTR 4.0e-35
FL-Next: sp=Putative ABC transporter C family member 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 9-like 7.26573e-41
Internal
biog3_v1.0_unigene2726 biogeco3 v1.0 670
AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Putative C-terminus
biog3_v1.0_unigene4255 biogeco3 v1.0 1075
AutoFact: putative ABC transporter [Hordeum vulgare subsp. vulgare] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter family protein 0.0
Internal
biog3_v1.0_unigene5023 biogeco3 v1.0 692
AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9SAP4_RICCO 0.0
FL-Next: sp=ABC transporter C family member 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
biog3_v1.0_unigene5148 biogeco3 v1.0 227
AutoFact: ABC transporter C family member 2 [Arabidopsis thaliana] ref|NP_001189675.1| ABC transporter C family member 2 [Arabidopsis thaliana] sp|Q42093.2|AB2C_ARATH RecName: Full=ABC transporter C family member 2; Short=ABC transporter ABCC.2; Short=AtABCC2; AltN 0.0
Blast2go: abc transporter c family member 2 0.0
unknown
biog3_v1.0_unigene6091 biogeco3 v1.0 1284
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Putative C-terminus
biog3_v1.0_unigene7042 biogeco3 v1.0 439
AutoFact: putative ABC transporter [Hordeum vulgare subsp. vulgare] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter family protein 0.0
C-terminus
biog3_v1.0_unigene7707 biogeco3 v1.0 321
AutoFact: ABC transporter C family member 2 [Arabidopsis thaliana] ref|NP_001189675.1| ABC transporter C family member 2 [Arabidopsis thaliana] sp|Q42093.2|AB2C_ARATH RecName: Full=ABC transporter C family member 2; Short=ABC transporter ABCC.2; Short=AtABCC2; AltN 0.0
FL-Next: sp=ABC transporter C family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 2 0.0
C-terminus
biog3_v1.0_unigene7888 biogeco3 v1.0 328
AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 1.0e-32
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member mitochondrial-like 4.25317e-39
C-terminus
biog3_v1.0_unigene9154 biogeco3 v1.0 199
AutoFact: MRP-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: sp=ABC transporter C family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
biog3_v1.0_unigene9353 biogeco3 v1.0 345
AutoFact: ABC transporter C family member 5 n=4 Tax=Arabidopsis RepID=AB5C_ARATH 0.0
FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 5-like 0.0
Internal
biog3_v1.0_unigene9537 biogeco3 v1.0 204
AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
biog3_v1.0_unigene10294 biogeco3 v1.0 350
AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug resistance protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain