Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: ATPase, AAA-type, core

Term: IPR003959  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene355 biogeco3 v1.0 420
AutoFact: replication factor C 40kDa subunit [Oryza sativa Japonica Group] emb|CAH67033.1| OSIGBa0139P06.6 [Oryza sativa Indica Group] gb|EEC77820.1| hypothetical protein OsI_17026 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 2-like 0.0
C-terminus
biog3_v1.0_unigene368 biogeco3 v1.0 1229
AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar sorting protein 4b 0.0
C-terminus
biog3_v1.0_unigene514 biogeco3 v1.0 714
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
biog3_v1.0_unigene524 biogeco3 v1.0 733
AutoFact: putative FtsH protease [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent metalloprotease 0.0
C-terminus
biog3_v1.0_unigene749 biogeco3 v1.0 1683
AutoFact: 26S proteasome regulatory subunit 4 homolog A n=26 Tax=Embryophyta RepID=PRS4A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s proteasome subunit 4 0.0
Complete
biog3_v1.0_unigene758 biogeco3 v1.0 288
AutoFact: ATP-dependent protease La, putative n=1 Tax=Ricinus communis RepID=B9SS30_RICCO 0.0
Blast2go: atp-dependent protease 0.0
unknown
biog3_v1.0_unigene905 biogeco3 v1.0 688
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene938 biogeco3 v1.0 1591
AutoFact: 26S protease regulatory subunit 7 homolog A n=26 Tax=Embryophyta RepID=PRS7A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulatory particle triple-a 1a 0.0
Complete
biog3_v1.0_unigene1167 biogeco3 v1.0 630
AutoFact: cell division protein FtsH-like [Arabidopsis thaliana] 0.0
FL-Next: sp=ATP-dependent zinc metalloprotease FtsH; Cyanidium caldarium. Plastid; Chloroplast. 0.0
Blast2go: cell division protein 0.0
C-terminus
biog3_v1.0_unigene1170 biogeco3 v1.0 372
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8S2N6_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
Internal
biog3_v1.0_unigene1195 biogeco3 v1.0 308
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AEE82370.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
Blast2go: aaa-type atpase family protein 0.0
unknown
biog3_v1.0_unigene1218 biogeco3 v1.0 528
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8S2N6_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
Putative N-terminus
biog3_v1.0_unigene1219 biogeco3 v1.0 556
AutoFact: RecName: Full=Pleiotropic drug resistance protein TUR2; Short=Protein Turion 2 emb|CAA94437.1| PDR5-like ABC transporter [Spirodela polyrhiza] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
biog3_v1.0_unigene1337 biogeco3 v1.0 601
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene1381 biogeco3 v1.0 319
AutoFact: polypyrimidine tract-binding protein 2 [Arabidopsis thaliana] sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2 dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like [Arabidopsis thaliana] gb|AAU90050.1 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene1428 biogeco3 v1.0 822
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
biog3_v1.0_unigene1514 biogeco3 v1.0 618
AutoFact: cell division protein FtsH-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division protein 0.0
Internal
biog3_v1.0_unigene1522 biogeco3 v1.0 610
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family protein 0.0
Complete
biog3_v1.0_unigene1552 biogeco3 v1.0 1621
AutoFact: 26S protease regulatory subunit 6B homolog n=13 Tax=Embryophyta RepID=PRS6B_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene1745 biogeco3 v1.0 312
AutoFact: Replication factor C large subunit (Fragment) n=2 Tax=Poaceae RepID=Q8L6A5_9POAL 0.0
Blast2go: replication factor c subunit 1-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain