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Assembly Name: biogeco3 v1.0

Name: Chaperonin TCP-1, conserved site

Term: IPR002194  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1004 biogeco3 v1.0 763
AutoFact: T-complex protein 1 subunit alpha n=5 Tax=Poaceae RepID=Q7FAT6_ORYSJ 0.0
FL-Next: sp=T-complex protein 1 subunit delta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit alpha-like 0.0
N-terminus
biog3_v1.0_unigene1104 biogeco3 v1.0 274
AutoFact: Chaperonin protein n=6 Tax=Poaceae RepID=Q6ASR1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit zeta 0.0
N-terminus
biog3_v1.0_unigene1690 biogeco3 v1.0 778
AutoFact: TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] gb|AAO22566.1| putative chaperonin gamma chain [Arabidopsis thaliana] gb|AED93554.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit gamma-like 0.0
N-terminus
biog3_v1.0_unigene2120 biogeco3 v1.0 357
AutoFact: cyclin B1 [Nicotiana tabacum] 0.0
Blast2go: protein 0.0
Putative coding
biog3_v1.0_unigene3324 biogeco3 v1.0 463
AutoFact: putative LRR receptor-like serine/threonine-protein kinase RKF3 [Arabidopsis thaliana] sp|P93050.1|RKF3_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase RKF3; AltName: Full=Receptor-like kinase in flowers 3; Flags: Precursor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase rkf3-like 0.0
Internal
biog3_v1.0_unigene3388 biogeco3 v1.0 906
AutoFact: cyclin B1 [Nicotiana tabacum] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene3478 biogeco3 v1.0 636
AutoFact: SIT4 phosphatase-associated family protein [Arabidopsis thaliana] gb|AAM83251.1| At1g07990/T6D22_5 [Arabidopsis thaliana] gb|AAO42781.1| At1g07990/T6D22_5 [Arabidopsis thaliana] gb|AEE28224.1| SIT4 phosphatase-associated family protein [Arabidopsis thalia 0.0
Blast2go: serine threonine-protein phosphatase 6 regulatory subunit 3-like 0.0
Putative coding
biog3_v1.0_unigene3713 biogeco3 v1.0 848
AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: niemann-pick c1 0.0
C-terminus
biog3_v1.0_unigene4229 biogeco3 v1.0 2032
AutoFact: TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] gb|AAK43867.1|AF370490_1 putative T-complex protein 1, theta subunit; TCP-1-Theta [Arabidopsis thaliana] gb|AAQ56831.1| At3g03960 [Arabidopsis thaliana] gb|AEE74018.1| TCP-1/cpn60 chaperonin fam 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit theta-like 0.0
Complete
biog3_v1.0_unigene4383 biogeco3 v1.0 2267
AutoFact: T complex protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit epsilon 0.0
Complete
biog3_v1.0_unigene4688 biogeco3 v1.0 214
AutoFact: CRS1_YhbY domain containing protein 1.0e-18
FL-Next: sp=CRS2-associated factor 2, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: crs2-associated factor mitochondrial-like 0.0
C-terminus
biog3_v1.0_unigene4907 biogeco3 v1.0 1200
AutoFact: TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] gb|AAO22566.1| putative chaperonin gamma chain [Arabidopsis thaliana] gb|AED93554.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit gamma-like 0.0
C-terminus
biog3_v1.0_unigene5492 biogeco3 v1.0 656
AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 0.0
FL-Next: tr=Cholesterol transport protein; subsp. trichocarpa). 0.0
Blast2go: niemann-pick c1 0.0
Internal
biog3_v1.0_unigene5493 biogeco3 v1.0 428
AutoFact: Cyclin B, putative n=1 Tax=Ricinus communis RepID=B9R8N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin 0.0
Internal
biog3_v1.0_unigene6001 biogeco3 v1.0 2122
AutoFact: TCP domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJD1_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit beta 0.0
Complete
biog3_v1.0_unigene6121 biogeco3 v1.0 835
AutoFact: T-complex protein 1 subunit delta n=2 Tax=Selaginella moellendorffii RepID=D8QXT8_SELML 0.0
FL-Next: sp=T-complex protein 1 subunit delta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytosolic delta subunit 0.0
Putative C-terminus
biog3_v1.0_unigene6620 biogeco3 v1.0 416
AutoFact: TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] gb|AAF23199.1|AC016795_12 putative T-complex protein 1, ETA subunit [Arabidopsis thaliana] gb|AAL49938.1| AT3g11830/F26K24_12 [Arabidopsis thaliana] gb|AAM26704.1| AT3g11830/F26K24_12 [Arabidops 0.0
FL-Next: sp=T-complex protein 1 subunit gamma; Thalassiosira weissflogii (Marine diatom). 0.0
Blast2go: t-complex protein 1 subunit eta-like 0.0
Putative N-terminus
biog3_v1.0_unigene6661 biogeco3 v1.0 725
AutoFact: T-complex protein 1 subunit delta n=2 Tax=Selaginella moellendorffii RepID=D8QXT8_SELML 0.0
FL-Next: sp=T-complex protein 1 subunit delta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytosolic delta subunit 0.0
C-terminus
biog3_v1.0_unigene8326 biogeco3 v1.0 545
AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 0.0
Blast2go: niemann-pick c1 0.0
unknown
biog3_v1.0_unigene9020 biogeco3 v1.0 276
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: mog1 duf1795-like photosystem ii reaction center family protein 6.50972e-27
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain