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Assembly Name: biogeco3 v1.0

Name: Glycoside hydrolase, subgroup, catalytic domain

Term: IPR013781  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene8914 biogeco3 v1.0 350
AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
unknown
biog3_v1.0_unigene9431 biogeco3 v1.0 187
AutoFact: alpha-amylase-like 3 [Arabidopsis thaliana] gb|AAK91414.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AAN18209.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AEE34983.1| alpha-amylase-like 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Alpha-amylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: alpha-amylase isozyme 3d 0.0
Internal
biog3_v1.0_unigene9493 biogeco3 v1.0 1712
AutoFact: beta-amylase 7 [Arabidopsis thaliana] sp|O80831.2|BAM7_ARATH RecName: Full=Beta-amylase 7; AltName: Full=1,4-alpha-D-glucan maltohydrolase; AltName: Full=Beta-amylase 4 gb|AEC10613.1| beta-amylase 7 [Arabidopsis thaliana] 0.0
FL-Next: sp=Beta-amylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-amylase 8-like 0.0
Putative Complete
biog3_v1.0_unigene9546 biogeco3 v1.0 533
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 0.0
Internal
biog3_v1.0_unigene9574 biogeco3 v1.0 267
AutoFact: putative alpha-glucanotransferase [Bacteroides fragilis NCTC 9343] emb|CAH09301.1| putative alpha-glucanotransferase [Bacteroides fragilis NCTC 9343] 0.0
FL-Next: sp=4-alpha-glucanotransferase DPE2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 4-alpha-glucanotransferase 0.0
Internal
biog3_v1.0_unigene9759 biogeco3 v1.0 1306
AutoFact: Pollen allergen CJP38 n=1 Tax=Cryptomeria japonica RepID=Q588B8_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta- -glucanase 0.0
Complete
biog3_v1.0_unigene9797 biogeco3 v1.0 769
AutoFact: putative alpha-glucanotransferase [Bacteroides fragilis NCTC 9343] emb|CAH09301.1| putative alpha-glucanotransferase [Bacteroides fragilis NCTC 9343] 0.0
FL-Next: sp=4-alpha-glucanotransferase DPE2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: 4-alpha-glucanotransferase 0.0
Internal
biog3_v1.0_unigene9906 biogeco3 v1.0 589
AutoFact: Cellulase (glycosyl hydrolase family 5) protein [Arabidopsis thaliana] gb|AAU05478.1| At1g13130 [Arabidopsis thaliana] gb|AEE28973.1| Cellulase (glycosyl hydrolase family 5) protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulase (glycosyl hydrolase family 5) protein 0.0
Internal
biog3_v1.0_unigene9961 biogeco3 v1.0 403
AutoFact: ribonuclease H2 subunit B [Xenopus laevis] sp|Q5HZP1.1|RNH2B_XENLA RecName: Full=Ribonuclease H2 subunit B; Short=RNase H2 subunit B; AltName: Full=Ribonuclease HI subunit B gb|AAH88940.1| LOC496343 protein [Xenopus laevis] 9.0e-22
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: ribonuclease h2 subunit b 0.0
N-terminus
biog3_v1.0_unigene9983 biogeco3 v1.0 882
AutoFact: Beta-galactosidase n=1 Tax=Picea sitchensis RepID=A9NUR2_PICSI 0.0
FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-galactosidase 8 0.0
Internal
biog3_v1.0_unigene9985 biogeco3 v1.0 1516
AutoFact: Glycoside hydrolase, family 17; X8 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
N-terminus
biog3_v1.0_unigene10126 biogeco3 v1.0 957
AutoFact: Callose synthase n=1 Tax=Arabidopsis thaliana RepID=F4JDA3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: callose synthase 10 0.0
Complete
biog3_v1.0_unigene10436 biogeco3 v1.0 460
AutoFact: Glucan endo-1,3-beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9RBE5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Internal
biog3_v1.0_unigene10573 biogeco3 v1.0 765
AutoFact: NMDA receptor-regulated protein, putative n=1 Tax=Ricinus communis RepID=B9RUV2_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
biog3_v1.0_unigene10588 biogeco3 v1.0 983
AutoFact: O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] gb|AAF02143.1|AC009853_3 putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] dbj|BAC42699.1| putative beta-1,3-glucanase precursor [Arabidopsis thaliana] gb|AAO64098.1| putative g 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: o-glycosyl hydrolases family 17 protein 0.0
C-terminus
biog3_v1.0_unigene10729 biogeco3 v1.0 933
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100852591 0.0
N-terminus
biog3_v1.0_unigene10883 biogeco3 v1.0 295
AutoFact: RecName: Full=Cysteine protease ATG4B; AltName: Full=Autophagy-related protein 4 homolog B; Short=Protein autophagy 4; AltName: Full=OsAtg4 0.0
Blast2go: cysteine protease atg4-like 0.0
unknown
biog3_v1.0_unigene10908 biogeco3 v1.0 930
AutoFact: Glucan endo-1,3-beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9RBE5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
C-terminus
biog3_v1.0_unigene10911 biogeco3 v1.0 760
AutoFact: Isoamylase isoform 3 n=1 Tax=Solanum tuberosum RepID=Q84YG5_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: isoamylase chloroplastic-like 0.0
Complete
biog3_v1.0_unigene11012 biogeco3 v1.0 939
AutoFact: Beta-galactosidase n=1 Tax=Picea sitchensis RepID=A9NUR2_PICSI 0.0
FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-galactosidase 8 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain