Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: Cyclin, N-terminal

Term: IPR006671  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene144 biogeco3 v1.0 490
AutoFact: Cyclin-L1, putative n=1 Tax=Ricinus communis RepID=B9RTZ2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin t1 0.0
Internal
biog3_v1.0_unigene670 biogeco3 v1.0 380
AutoFact: plectin-related protein [Arabidopsis thaliana] ref|NP_850085.1| plectin-related protein [Arabidopsis thaliana] gb|AAB95312.1| hypothetical protein [Arabidopsis thaliana] gb|AAM97015.1| unknown protein [Arabidopsis thaliana] gb|AAN15512.1| unknown protein 0.0
Blast2go: plectin-related protein 0.0
unknown
biog3_v1.0_unigene921 biogeco3 v1.0 881
AutoFact: pfam08613, Cyclin, Cyclin 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
biog3_v1.0_unigene1583 biogeco3 v1.0 313
AutoFact: cyclin D protein [Physcomitrella patens] emb|CAD21955.1| cyclin D [Physcomitrella patens] 0.0
Blast2go: cyclin d protein 0.0
unknown
biog3_v1.0_unigene1719 biogeco3 v1.0 373
AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML 0.0
Blast2go: ubiquitin-protein pub13 0.0
unknown
biog3_v1.0_unigene1947 biogeco3 v1.0 831
AutoFact: plectin-related protein [Arabidopsis thaliana] ref|NP_850085.1| plectin-related protein [Arabidopsis thaliana] gb|AAB95312.1| hypothetical protein [Arabidopsis thaliana] gb|AAM97015.1| unknown protein [Arabidopsis thaliana] gb|AAN15512.1| unknown protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: plectin-related protein 0.0
Internal
biog3_v1.0_unigene2063 biogeco3 v1.0 946
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SG36_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u-box domain-containing protein 4-like 0.0
C-terminus
biog3_v1.0_unigene2120 biogeco3 v1.0 357
AutoFact: cyclin B1 [Nicotiana tabacum] 0.0
Blast2go: protein 0.0
Putative coding
biog3_v1.0_unigene2496 biogeco3 v1.0 876
AutoFact: Cyclin-C1-1 n=8 Tax=Poaceae RepID=CCC11_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin family protein 0.0
Complete
biog3_v1.0_unigene2599 biogeco3 v1.0 475
AutoFact: Cyclin-T1-3 n=3 Tax=Oryza sativa RepID=CCT13_ORYSJ 6.0e-20
Blast2go: cyclin family protein 1.11415e-21
unknown
biog3_v1.0_unigene3050 biogeco3 v1.0 736
AutoFact: Oligopeptide transporter, putative n=1 Tax=Ricinus communis RepID=B9SH54_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrate transporter 0.0
Internal
biog3_v1.0_unigene3069 biogeco3 v1.0 1265
AutoFact: putative thaumatin-like protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thaumatin-like protein 0.0
C-terminus
biog3_v1.0_unigene3077 biogeco3 v1.0 789
AutoFact: Cyclin-U2-1 n=2 Tax=Arabidopsis RepID=CCU21_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuc-1 negative regulatory protein 0.0
C-terminus
biog3_v1.0_unigene3080 biogeco3 v1.0 858
AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9T6M4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proton-dependent oligopeptide transport family protein 0.0
C-terminus
biog3_v1.0_unigene3388 biogeco3 v1.0 906
AutoFact: cyclin B1 [Nicotiana tabacum] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene3412 biogeco3 v1.0 455
AutoFact: cyclin [Adiantum capillus-veneris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene3416 biogeco3 v1.0 207
AutoFact: cyclin H-1 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Cyclin-H1-1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: cyclin h-1 0.0
Internal
biog3_v1.0_unigene3431 biogeco3 v1.0 284
AutoFact: Cyclin-T1-3 n=3 Tax=Oryza sativa RepID=CCT13_ORYSJ 6.0e-20
FL-Next: sp=Cyclin-T1-3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: cyclin family protein 1.11415e-21
Internal
biog3_v1.0_unigene3942 biogeco3 v1.0 1350
AutoFact: D3-type cyclin (Fragment) n=3 Tax=Populus RepID=A8Y914_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: d3-type cyclin 0.0
Complete
biog3_v1.0_unigene5357 biogeco3 v1.0 639
AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein pub13 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain