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Assembly Name: biogeco3 v1.0

Name: Ubiquitin-conjugating enzyme/RWD-like

Term: IPR016135  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene5707 biogeco3 v1.0 290
AutoFact: Glucan endo-1,3-beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9SP53_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Internal
biog3_v1.0_unigene5736 biogeco3 v1.0 1161
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NPX2_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 0.0
Complete
biog3_v1.0_unigene6071 biogeco3 v1.0 1259
AutoFact: Probable ubiquitin-conjugating enzyme E2 n=3 Tax=Picea RepID=O65079_PICMA 0.0
FL-Next: tr=Probable ubiquitin-conjugating enzyme E2; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 0.0
Complete
biog3_v1.0_unigene6372 biogeco3 v1.0 572
AutoFact: Unassigned protein
FL-Next: sp=VHS domain-containing protein At3g16270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vhs domain-containing protein at3g16270-like 0.0
Putative C-terminus
biog3_v1.0_unigene6417 biogeco3 v1.0 534
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ring finger 0.0
Internal
biog3_v1.0_unigene6458 biogeco3 v1.0 1538
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5ADG8_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 22-like 0.0
Complete
biog3_v1.0_unigene7001 biogeco3 v1.0 859
AutoFact: Ubiquitin-conjugating enzyme E2 variant 1C n=3 Tax=Eukaryota RepID=D3PJZ2_9MAXI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme family protein 0.0
Complete
biog3_v1.0_unigene7287 biogeco3 v1.0 741
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
Putative C-terminus
biog3_v1.0_unigene7328 biogeco3 v1.0 340
AutoFact: Ubiquitin-conjugating enzyme 2 n=1 Tax=Elaeis guineensis RepID=B3TM02_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme 2 0.0
N-terminus
biog3_v1.0_unigene7332 biogeco3 v1.0 646
AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene7433 biogeco3 v1.0 261
AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKP2_PICSI 0.0
Blast2go: ubiquitin-conjugating enzyme e2-18 0.0
unknown
biog3_v1.0_unigene7534 biogeco3 v1.0 479
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: ring finger 0.0
C-terminus
biog3_v1.0_unigene8023 biogeco3 v1.0 359
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Pumilio homolog 23 OS=Arabidopsis thaliana GN=APUM23 0.0
Blast2go: pumilio 23 0.0
Internal
biog3_v1.0_unigene8105 biogeco3 v1.0 403
AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
FL-Next: sp=Probable ubiquitin-conjugating enzyme E2 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene8729 biogeco3 v1.0 402
AutoFact: Ubiquitin-conjugating enzyme E2 n=2 Tax=Pinaceae RepID=Q9ZRS7_PSEMZ 0.0
FL-Next: tr=Ubiquitin-conjugating enzyme E2; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Blast2go: ubiquitin-conjugating enzyme e2-18 0.0
Putative Complete
biog3_v1.0_unigene8914 biogeco3 v1.0 350
AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
unknown
biog3_v1.0_unigene9084 biogeco3 v1.0 249
AutoFact: protein ELC [Arabidopsis thaliana] sp|Q9LHG8.1|ELC_ARATH RecName: Full=Protein ELC; Short=AtELC; AltName: Full=ESCRT-I complex subunit VPS23 homolog 1; AltName: Full=Vacuolar protein-sorting-associated protein 23 homolog 1 gb|AAG51025.1|AC069474_24 unknow 0.0
Blast2go: protein elc 0.0
unknown
biog3_v1.0_unigene9163 biogeco3 v1.0 686
AutoFact: Ubiquitin-conjugating enzyme E2 variant 1C n=3 Tax=Eukaryota RepID=D3PJZ2_9MAXI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme spm2 0.0
Putative Complete
biog3_v1.0_unigene9757 biogeco3 v1.0 485
AutoFact: PREDICTED: similar to RWDD4A protein isoform 1 [Gallus gallus] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rwd domain-containing protein 4-like 0.0
Internal
biog3_v1.0_unigene9834 biogeco3 v1.0 996
AutoFact: Ubiquitin-conjugating enzyme E2 35 n=42 Tax=Embryophyta RepID=UBC35_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme 1 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain