|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene263
|
biogeco3 v1.0
|
463
|
|
• AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t
|
0.0
|
|
• FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: probable splicing factor 3a subunit 1-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene342
|
biogeco3 v1.0
|
438
|
|
• AutoFact: Rtf2 domain containing protein
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene362
|
biogeco3 v1.0
|
737
|
|
• AutoFact: Polyubiquitin-C n=2 Tax=Sus scrofa RepID=UBC_PIG
|
0.0
|
|
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa).
|
0.0
|
|
• Blast2go: polyubiquitin 10
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene513
|
biogeco3 v1.0
|
416
|
|
• AutoFact: [O] COG5272 Ubiquitin
|
0.0
|
|
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa).
|
0.0
|
|
• Blast2go: ubiquitin
|
0.0
|
|
Putative Complete
|
|
biog3_v1.0_unigene584
|
biogeco3 v1.0
|
387
|
|
• AutoFact: E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana] sp|Q9SU29.1|UPL5_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL5; Short=Ubiquitin-protein ligase 5 emb|CAB41727.2| polyubiquitin-like protein [Arabidopsis thaliana] emb|CAB78300.1| polyubiquitin
|
0.0
|
|
• FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase upl5
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene682
|
biogeco3 v1.0
|
381
|
|
• AutoFact: leucine-rich repeat-containing protein [Arabidopsis thaliana] gb|AAM13067.1| unknown protein [Arabidopsis thaliana] gb|AAM91174.1| unknown protein [Arabidopsis thaliana] gb|AED91220.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: leucine rich repeat-like protein
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene693
|
biogeco3 v1.0
|
1274
|
|
• AutoFact: [O] COG5272 Ubiquitin
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ubiquitin
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene699
|
biogeco3 v1.0
|
425
|
|
• AutoFact: initiator-binding protein [Zea mays]
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene1268
|
biogeco3 v1.0
|
861
|
|
• AutoFact: Transcription initiation factor TFIID, subunit TAF1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKZ9_PHYPA
|
0.0
|
|
• FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: transcription initiation factor subunit taf1
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1715
|
biogeco3 v1.0
|
397
|
|
• AutoFact: Ubiquitin, putative n=1 Tax=Ricinus communis RepID=B9RSH8_RICCO
|
0.0
|
|
• FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: phosphoinositide 4-kinase gamma 4
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene2048
|
biogeco3 v1.0
|
370
|
|
• AutoFact: E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana] sp|Q9SU29.1|UPL5_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL5; Short=Ubiquitin-protein ligase 5 emb|CAB41727.2| polyubiquitin-like protein [Arabidopsis thaliana] emb|CAB78300.1| polyubiquitin
|
0.0
|
|
• FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase upl5
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene2062
|
biogeco3 v1.0
|
432
|
|
• AutoFact: Ubiquitin, putative n=1 Tax=Ricinus communis RepID=B9RSH8_RICCO
|
0.0
|
|
• Blast2go: probable phosphatidylinositol 4-kinase type 2-beta at1g26270-like
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene2281
|
biogeco3 v1.0
|
287
|
|
• AutoFact: putative bHLH transcription factor [Arabidopsis thaliana]
|
4.0e-29
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: bhlh transcription factor
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene2456
|
biogeco3 v1.0
|
303
|
|
• AutoFact: ubiquitin-like domain-containing CTD phosphatase [Arabidopsis thaliana] sp|Q8W3M6.1|UBCP_ARATH RecName: Full=Ubiquitin-like domain-containing CTD phosphatase dbj|BAB83612.1| unknown protein [Arabidopsis thaliana] gb|AEE82552.1| ubiquitin-like domain-conta
|
0.0
|
|
• Blast2go: ubiquitin-like domain-containing ctd phosphatase
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene3467
|
biogeco3 v1.0
|
512
|
|
• AutoFact: putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gb|AAP54456.1| U5 snRNP-associated 102 kDa protein, putative, expressed [Oryza sativa Japonica Group] gb|EAY79087.1| hypothetical protein OsI_34194 [Oryza sativa Indica Group]
|
0.0
|
|
• FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii).
|
0.0
|
|
• Blast2go: pre-mrna splicing factor
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3532
|
biogeco3 v1.0
|
416
|
|
• AutoFact: HECT; Ubiquitin [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase upl5
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene3542
|
biogeco3 v1.0
|
449
|
|
• AutoFact: Ubiquitin, putative n=1 Tax=Ricinus communis RepID=B9RSH8_RICCO
|
0.0
|
|
• FL-Next: tr=Os02g0290500 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: phosphoinositide 4-kinase gamma 4
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene3702
|
biogeco3 v1.0
|
309
|
|
• AutoFact: BAG multi-domain protein
|
1.0e-13
|
|
• Blast2go: protein binding
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene3839
|
biogeco3 v1.0
|
232
|
|
• AutoFact: Ubiquitin, putative n=1 Tax=Ricinus communis RepID=B9RSH8_RICCO
|
0.0
|
|
• Blast2go: probable phosphatidylinositol 4-kinase type 2-beta at1g26270-like
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene4111
|
biogeco3 v1.0
|
472
|
|
• AutoFact: membrane-anchored ubiquitin-fold protein 6 [Arabidopsis thaliana] sp|Q8GWJ6.1|MUB6_ARATH RecName: Full=Membrane-anchored ubiquitin-fold protein 6; Short=AtMUB6; Short=Membrane-anchored ub-fold protein 6; Flags: Precursor dbj|BAC43392.1| unknown protein [A
|
1.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
